Mycolicibacterium chubuense: Mycch_3543
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Entry
Mycch_3543 CDS
T02150
Name
(GenBank) oligoribonuclease (3'->5' exoribonuclease)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mcb
Mycolicibacterium chubuense
Pathway
mcb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Mycch_3543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcb03019
]
Mycch_3543
03009 Ribosome biogenesis [BR:
mcb03009
]
Mycch_3543
Messenger RNA biogenesis [BR:
mcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mycch_3543
Ribosome biogenesis [BR:
mcb03009
]
Eukaryotic type
Pre-60S particles
RNases
Mycch_3543
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Phage_Wedge1
Motif
Other DBs
NCBI-ProteinID:
AFM18279
UniProt:
I4BLX2
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All DBs
Position
3739081..3739728
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AA seq
215 aa
AA seq
DB search
MWSPVRDELVWIDCEMTGLDLKSDRLIEIAVLVTDSELNVLGDGLDVVIHTDEDALSSMI
DVVAQMHSKSGLVEEVRASTVDLATAEEMALDYIREHVKQAKTAPLAGNSIATDRGFIAR
DMPKLDDYLHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELRYYRQT
AFVAPPGPSTSDIAAIAAQLGPGSQSDSAPGPSNG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgtggagccctgtgcgtgacgaactggtgtggatcgactgtgagatgaccgggctggac
ctcaaatcggatcggctcatcgagatcgcggtgctggttacggactcggagctcaacgtc
ctcggcgacggtctggacgtggtcatccacaccgacgaggacgcgctgtcctcgatgatc
gacgtcgtggcccagatgcacagcaagtccggactcgtcgaggaggtgcgggcatccacc
gtcgacctcgccaccgccgaggagatggcactcgactacatccgcgagcatgtcaagcag
gccaagaccgcaccgctggccggcaattcgatcgcgacggaccgggggttcatcgcccgc
gacatgcccaagctcgacgactacctgcactaccggatgatcgacgtcagctcgatcaag
gagctgtgccggcgctggtacccgcgcatctacttcgggcagccggagaagggcctggcc
caccgcgcgctggccgacatccacgagtcgatccgggagttgcgctactaccgccagacc
gcgttcgtggcacctcccggcccgtcgaccagcgacatcgcggccatcgccgcacaactc
gggcccggttcgcaatcggattcggctcctgggccctcgaacggctag
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