Mycolicibacterium chubuense: Mycch_4153
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Entry
Mycch_4153 CDS
T02150
Name
(GenBank) topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mcb
Mycolicibacterium chubuense
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcb03032
]
Mycch_4153
03400 DNA repair and recombination proteins [BR:
mcb03400
]
Mycch_4153
Enzymes [BR:
mcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mycch_4153
DNA replication proteins [BR:
mcb03032
]
Prokaryotic type
DNA Topoisomerases
Mycch_4153
DNA repair and recombination proteins [BR:
mcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mycch_4153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glyphos_transf
Motif
Other DBs
NCBI-ProteinID:
AFM18871
UniProt:
I4BNL4
LinkDB
All DBs
Position
complement(4358531..4359550)
Genome browser
AA seq
339 aa
AA seq
DB search
MRLTRSKLDTPGIVRKRRGKGFAFYGPDGELLSDPDTAQRIKDLVIPPAWKNVWISPRPN
GHIQAVGTDAAGRRQYLYHERWQQERAEEKFDRVLELSARLPEWRTQIAADLAGRGLTRD
RVLALALQLLDRGYFRAGGEQSAEEHEHYGLATLLCEHVTLKKNAVEFDYPAKSGVQRTV
EVDDPEVVRAVRSLMRRNERTERLLVCRSNSGSWVDVRADDLNTRFKELVGDEFSVKDLR
TWHGTVLAAAAFADAKEPTSKTAVKRAASAVMKEVSQELGNTPAVARASYVDPRVVVGYE
RGVTIAAATRRAAKMKNPDDAQAIVEKATRNLIRRIASK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctcactcgtagcaagctcgacacccccggcatcgtcaggaaacgtcgcggtaaa
gggtttgccttctacggtcccgacggtgaactgctgtccgatccggacaccgctcagcgg
atcaaggacctggtcatccccccggcgtggaagaacgtgtggatcagccccaggccgaac
gggcacatccaggccgtcggcaccgacgccgccggacgacggcagtacctctaccacgag
cggtggcagcaggagcgcgccgaggagaaattcgaccgcgtgctcgaactctcggcacgg
ctgcccgaatggcgcacgcagatcgcggcggatctggcggggcgcggcctgacccgggac
cgggtgctggcgctggccctgcagttgctcgaccgcgggtacttccgcgcagggggtgag
cagtccgccgaggagcacgagcactacgggctggcgacactgctgtgcgagcacgtgacg
ctgaagaagaatgccgtcgagttcgactatcccgccaagagcggggtgcagcgcaccgtc
gaggtggacgaccccgaggtcgtgcgggccgtgcgctcgttgatgcggcgcaacgagcgc
acggaacgacttctggtgtgtcgcagcaactccggtagctgggtcgatgtccgcgccgat
gatctcaacactcggttcaaggaactggtcggcgacgagttcagcgtgaaggatctgcgc
acctggcacggcacggtgctggccgccgccgctttcgccgatgccaaggagccgacgtcg
aagacggcggtcaagcgggccgcctcggcggtgatgaaggaggtctcccaggaactcggc
aacactccggcggtggcgcgggcgtcctacgtcgacccgcgggtcgtcgtgggctacgaa
cgcggcgtcaccatagcggccgccacccggcgggcggccaagatgaaaaaccccgacgac
gcgcaggcgatcgtcgagaaggccacccgaaacctcatccgccggatcgcgagcaagtag
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