Mycolicibacterium chubuense: Mycch_4269
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Entry
Mycch_4269 CDS
T02150
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcb
Mycolicibacterium chubuense
Pathway
mcb03420
Nucleotide excision repair
mcb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mycch_4269
03430 Mismatch repair
Mycch_4269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcb03400
]
Mycch_4269
Enzymes [BR:
mcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mycch_4269
DNA repair and recombination proteins [BR:
mcb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mycch_4269
MMR (mismatch excision repair)
Other MMR factors
Mycch_4269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFM18983
UniProt:
I4BNX6
LinkDB
All DBs
Position
complement(4477774..4480089)
Genome browser
AA seq
771 aa
AA seq
DB search
MSISTTAETDELLEGLNPQQRQAVLHEGTPLLIVAGAGSGKTAVLTRRIAYLLAARDVGV
GQVLAITFTNKAAAEMRERVVALVGPRARSMWVSTFHSTCVRILRNQASLLPGLNSNFSI
YDADDSRRLLLMIGKDLGLDTKKYSPRLLANGISNLKNELIGAEQAAAEASEAADDLARI
IAEVYGEYQRRLRAANALDFDDLIGETVAVLQAFPQIAQYYRRRFRHILVDEYQDTNHAQ
YVLVRELVGVGAADTDTVPPAELCVVGDADQSIYAFRGATIRNIEDFERDFPNATTILLE
QNYRSTQNILNAANSVIARNVGRRDKRLWTDAGEGELIVGYVADNEHDEARFVAQEIDAL
ADADSSFSYNDVAVFYRTNNSSRAIEEVFIRAGIPYKVVGGVRFYERREIRDVVAYLRVL
DNPGDSVSMRRILNTPRRGIGDRAEACVAVYAENTGSSFNDALLAAAEGKVPMLNTRAEK
AIAGFVALLDELRAGLDGELGELVESVLDRSGYRAELESSSDPQDLARLDNLNELVSVAH
EFSIDLANARALADEEAVDEDVPDTGVLASFLERVSLVADADDIPEHGAGVVTMMTLHTA
KGLEFPVVFVTGWEDGMFPHMRALGDPVELSEERRLAYVGITRARQRLYLSRAKVRSSWG
QPMLNPESRFLREIPQELIDWRRTEQAAPSRSAPVSGAGRFGTPRPSPTRGPAGKRPLLV
LEPGDRVTHDKYGLGRVEEVSGAGESAMSLIDFGSAGRVKLMHNHAPVSKL
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatctccaccaccgctgaaaccgatgagctcctcgagggcctcaacccccagcag
cgtcaggccgtgctgcatgagggaacgccactgctgatcgtcgccggggccggctccggc
aagacggcggtgctgacccgccgcatcgcctacctgctggccgcccgcgacgtcggagtg
gggcaggtgctggccatcacgttcaccaacaaggccgctgcggagatgcgcgagcgggtg
gtcgcgctggtcggcccacgcgcccggtccatgtgggtgtccaccttccactcgacctgt
gtgcggatcctgcgcaaccaggcctcgctgctgccggggctgaactccaacttctcgatc
tacgacgccgacgactcgcggcggctgctgctgatgatcggcaaggacctgggtctggac
accaagaagtactcgccgcggctgctggccaacggcatctccaacctcaagaacgagctg
atcggagccgagcaggccgcggccgaggcctccgaggcggccgacgacctggcgcgcatc
atcgccgaggtctacggggagtaccagcgccggttgcgcgccgccaacgccctggacttc
gacgacctcatcggtgagacggtcgctgtgctgcaagcgtttccgcagatcgcccagtac
taccggcggcggttccggcacatcctcgtcgacgagtaccaggacaccaaccacgcccag
tacgtcctcgtgcgcgagctggtcggtgtgggtgctgccgacaccgacacggtgccgccc
gccgagctgtgcgtcgtgggcgacgccgaccagtccatctacgcgttccgcggcgcgacg
atccgcaacatcgaggacttcgagcgcgacttccccaacgcgacaacgattctgctcgaa
cagaactaccgctcgacgcagaacatcctgaatgccgccaactcggtcatcgcccgcaac
gtgggccgccgggacaagcggctgtggaccgacgcgggcgagggcgagctgatcgtcggc
tacgtcgccgacaacgagcacgacgaagcccggttcgtcgcgcaggagatcgacgcactc
gccgacgccgacagcagcttctcctacaacgacgtcgcggtgttctaccgcaccaacaac
tcctcgcgcgcgatcgaggaagtcttcatccgcgccggaatcccctacaaagtcgtcggg
ggagtgcgcttctacgaacgcagggagattcgcgacgtcgtcgcctacctccgggtgctc
gacaaccccggcgattcggtcagcatgcggcgcattctcaacaccccccgccgcggcatc
ggcgatcgcgccgaagcgtgcgtggcggtgtatgcggagaacaccggctcgagtttcaac
gatgcgttgctcgccgcggccgagggcaaggtgccgatgctcaacacccgggccgagaag
gcgatcgccgggttcgtggcactgctcgacgagttgcgtgccgggctggacggtgagttg
ggtgaattggtcgaatcagtgctcgaccgctccggctaccgcgccgagctggagtcctcg
agtgacccgcaggacctcgcccggctcgacaacctcaacgaattggtcagcgtcgcacac
gaattcagcatcgacctggcaaacgcccgagccctcgccgatgaggaggccgttgacgag
gacgttcccgacaccggcgtactggcctcgttcctggagcgggtgtccctggtcgccgac
gccgacgacatccccgagcacggagcgggcgtagtgacgatgatgacgctgcacaccgcc
aaggggctggagttcccggtggtgttcgtgaccggctgggaggacggcatgttcccgcac
atgcgggcgctcggcgatccggtggagctttcggaagaacgccggctcgcctacgtcggc
atcacccgggcacgtcagcgcctctacctcagccgcgccaaagtgcgttcctcgtggggc
cagccgatgctcaatcccgagtcgcgattcctgcgggagatcccgcaggaactcatcgac
tggcgccgcaccgagcaggccgccccgtcgcggtcggcgccggtgagcggcgcgggccgg
ttcgggaccccacgtccgtccccgacgcggggtccggcgggcaagcgcccgctgctcgtt
ctcgagccgggcgaccgcgtcacccacgacaagtacggactcgggcgggtcgaggaggtc
tcgggtgccggcgagtccgccatgtcactgatcgacttcggcagcgccggacgcgtcaag
ctgatgcacaaccatgcgccggtcagcaagctctga
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