KEGG   Mycolicibacterium chubuense: Mycch_4293
Entry
Mycch_4293        CDS       T02150                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
mcb  Mycolicibacterium chubuense
Pathway
mcb03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mcb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Mycch_4293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcb03400]
    Mycch_4293
DNA repair and recombination proteins [BR:mcb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Mycch_4293
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AFM19007
UniProt: I4BP00
LinkDB
Position
4504040..4504951
AA seq 303 aa
MRSIWKGSIAFGLVNVPVKVYSATQDHDIKFHQVHAKDNGRIRYKRVCEIDGEEVEYRDI
ARAYDSDDGQTVIITDDDISTLPEERSREIEVLEFVPASDLDPMMYDKSYFLEPDGKSSK
SYVLLAKTLMETDRVAIVNFALRNKTRLAALRVKDFSKRDVMMIHTLLWPDEIRDPDFPI
LDKEVEVKPAELKMASQVVDSMTDDFNPDRYHDDYQDHLHELIQAKLEGGEAFATEEQPQ
ELDESEDVSDLLAKLEASVKARKEQSGSKEPAKKAPAKKAAKKAPAKKSAAKKAAKKAPA
KKS
NT seq 912 nt   +upstreamnt  +downstreamnt
atgcggtccatttggaaaggttcgatcgccttcggcctggtcaacgttccggtcaaggtc
tacagcgccacccaggatcacgacatcaagttccaccaggtgcacgccaaggacaacggg
cgcatccgctacaagcgggtgtgcgagatcgacggcgaggaggtcgaataccgcgacatc
gcgcgggcctacgactccgacgacggccagaccgtgatcatcaccgacgacgacatctcc
accctgcccgaggaacgcagccgcgagatcgaggtcctcgagttcgtccccgccagtgac
ctcgatccgatgatgtacgacaagagctacttcctcgagcccgacggaaaatcatcgaaa
tcctatgtgctgctggcgaagacactcatggagactgatcgcgtcgcgatcgtgaacttc
gcgctgcgcaacaagacgcggctggcggcgctgcgcgtcaaggacttcagcaagcgggac
gtgatgatgatccacacgctgctgtggcccgacgagatccgcgatcccgacttcccgatc
ctcgacaaggaagtcgaggtcaaacccgccgagctgaagatggccagccaggtcgtcgac
tcgatgaccgacgatttcaaccccgaccggtatcacgacgactaccaggaccatctccac
gagctgatccaggccaagctcgaaggcggcgaggccttcgccaccgaggagcagccgcag
gaactcgacgagagcgaggacgtgtccgatctgctcgccaagctggaggcgagcgtgaag
gcgcgcaaggagcagagcgggtcgaaggaaccggccaagaaagcgccggccaagaaggcc
gcgaagaaggctccggcgaagaagtcggccgccaagaaggccgccaagaaggccccggcc
aagaagagctga

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