Mycolicibacterium chubuense: Mycch_4749
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Entry
Mycch_4749 CDS
T02150
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mcb
Mycolicibacterium chubuense
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcb03032
]
Mycch_4749
03400 DNA repair and recombination proteins [BR:
mcb03400
]
Mycch_4749
Enzymes [BR:
mcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mycch_4749
DNA replication proteins [BR:
mcb03032
]
Prokaryotic type
DNA Topoisomerases
Mycch_4749
DNA repair and recombination proteins [BR:
mcb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mycch_4749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Rep_1B
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AFM19449
UniProt:
I4BQ92
LinkDB
All DBs
Position
complement(4995254..4998088)
Genome browser
AA seq
944 aa
AA seq
DB search
MADRDRASGGNGVDEPRARRANGNVRRLVIVESPTKARKIAGYLGSNYIVESSRGHIRDL
PRAAADVPAKYKSEPWARLGVNVDEDFEPLYIISPEKKSTVAELKDKLKSVDELYLATDG
DREGEAIAWHLLETLKPRIPVKRMVFHEITEPAIRAAAEDPRDLDNDLVDAQETRRILDR
LYGYEVSPVLWKKVAPKLSAGRVQSVATRIIVSRERERMAFRSAGYWDVTAELDASVSDA
QASPPTFTAKLNTVDGRRVATGRDFDSLGAVRKPDEVLVLDEAAANALATGLRGAQLAVS
SVEQKPYTRRPYAPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSQ
SAIDAARNQARQLYGEEYVHPSPRQYTRKVKNAQEAHEAIRPSGDGFQTPGQLHAQLDTD
EFRLYELIWQRTVASQMADARGTTLSLRIAGQAGTGEQVVFNASGRTITFPGFLKAYVES
LDDQAGGEADDAESRLPNLTQGQRVDAKELTADGHTTSPPARYTEASLIKALEDLGIGRP
STYSSIIKTIQDRGYVHKKGSALVPSWVAFAVTGLLEQHFSRLVDYDFTAAMEDELDEIA
AGHERRTNWLNNFYFGGEHGVDGSIARAGGLKKLVGGNLEEIDAREVNSIKLFDDAEGRA
INVRVGRNGAYLERMVLDEDGELKPQRANLSDDLTPDELTLELAEKLFATPQEGRSLGVD
PETGHEIVAKDGRYGPYVTEVLPEPPGDEGEAGSPAKKGKKPTGPKPRTGSLLRSMDLET
VTLEDALKLLSLPRVVGVDPANGEEITAQNGRYGPYLKRGTDSRSLATEQQIFDITLDEA
LKIYAEPKRRGRQGAATPPLRELGNDPVSGKPMVIKDGRFGPYVTDGETNASLRKGDDVL
SITDERASELLADRRARGPVKRTKKAPAKKAAKKAGAKKAAKKA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaccgggaccgcgcgagcggaggaaacggcgtcgacgagccgcgtgcgcgcaga
gcgaacggtaacgtccggcgactcgtgatcgtcgagtcgcccaccaaggcgcgcaaaatc
gctggttatctgggctccaactacatcgtcgagtcgtctcgtgggcacatccgcgacctc
ccgcgggccgcggccgacgtgcccgcaaagtacaagtccgaaccgtgggcccggctcggg
gtcaacgtcgacgaggacttcgaaccgctctacatcatcagcccggagaagaagagcacc
gtcgccgagctgaaggacaagctcaagagcgtcgacgagctctacctcgccacagacggt
gaccgtgagggcgaagcgatcgcctggcacctgctcgagaccctcaagccgcgcatcccg
gtcaagcggatggtgttccacgagatcaccgagccggcgatccgtgcggccgccgaggac
ccgcgtgacctggacaacgacctggtcgacgcgcaggagacccgccgcatcctggaccgg
ctgtacggctacgaggtcagtccggtgctgtggaagaaagtcgcgccgaagctgtcggcg
ggccgggtgcagtcggtggcgacgcggatcatcgtctcgcgcgagcgcgagcggatggcg
ttccgcagcgccgggtactgggacgtcaccgccgagctcgacgcgagcgtgtccgacgcc
caggccagccctccgacgttcaccgccaagctcaacaccgtcgacggccgccgggtggcc
accggccgcgacttcgactccctgggcgcggttcgcaagcccgacgaggtgctggttctc
gacgaggcggcggccaacgcgctggccaccgggctgcgcggcgcacagctggccgtctcg
tcggtcgagcagaagccgtacacccgccgtccgtacgcgccgttcatgacctcgacgttg
cagcaggaggcgggccgcaagctgcgcttctcctcggagcgcacgatgagcatcgcgcag
cgcctctacgagaacggctacatcacctatatgcgaaccgactcgacgacgctgtcgcag
tcggccatcgatgcggcccgcaaccaggcccgtcagctgtacggcgaggagtacgtgcat
ccgtcgccgcgtcagtacacccgcaaggtcaagaacgcccaggaggcgcacgaggcgatc
cgtccgtccggtgacgggttccagacgcccgggcagctgcacgcccagctcgacaccgac
gaattccggctctacgagctgatctggcagcgcaccgtggcctcccagatggccgacgcg
cgcggcaccacgctgagcctgcgcatcgccggccaggccggtaccggagagcaggtcgtc
ttcaacgccagcggccgaaccatcacgttccccggcttcctgaaggcctacgtcgagagc
ctcgacgaccaggccggcggtgaggccgacgacgccgagagccggttgccgaacctgacg
cagggccagcgggtcgacgccaaggagctgaccgccgacgggcacaccaccagccccccg
gcccgctacacagaggcgtcgttgatcaaggcgctcgaggatctcgggatcggccgtccg
tcgacgtacagctcgatcatcaagacgatccaggaccgcggctacgtccacaagaagggc
agcgcgctggtcccgtcgtgggtggcgttcgccgtcaccggtctgctcgaacagcacttc
agtcggctggtcgactacgacttcaccgccgcgatggaagacgagctcgacgagatcgcc
gcgggccacgagcgaaggaccaactggctcaacaacttctacttcggcggtgagcatggc
gtcgacgggtcgatcgcacgcgccggtggccttaagaagctggtgggcggcaacctcgaa
gagatcgacgcccgagaagtcaactccatcaagcttttcgacgacgccgaggggcgggcg
atcaacgtccgcgtcggacgaaacggcgcctacctcgagcgcatggtgctcgacgaggac
ggcgagctcaagccgcaacgcgcgaatctcagcgacgacctcacgcccgacgagctgacc
ctcgagctggccgaaaagcttttcgcgacaccgcaagagggtcgatcgctcggcgtcgat
ccggagacgggtcatgagatcgtggccaaggacggccggtacgggccgtacgtcaccgag
gtcctgccggagcctcccggcgacgagggtgaggcgggatcaccggccaagaagggtaag
aagccgactggtcccaagccgcgcaccggttcgctgctgcgctcgatggacctggagacg
gtgacgctcgaggacgcgctcaagctgctgtcgctgccgcgtgtggtcggcgttgatccg
gccaacggtgaggagatcaccgcgcagaacgggcgttacggcccgtatctcaagcgcggc
accgactcccggtcactggccaccgagcagcagatcttcgacatcacactcgacgaggcg
ctgaagatctacgccgagcccaagcggcgcggcaggcagggcgcggcgacaccgccgctg
cgggagctgggcaacgatccggtctccggtaagccgatggtgatcaaggacggccgcttc
ggcccgtacgtcaccgacggcgagaccaacgcgagtctgcgcaagggcgacgacgtgctg
tcgatcaccgacgagcgtgcctccgagctgctcgccgaccgccgggcgcggggaccggtg
aagcgcacgaagaaggcgccggcgaagaaggcggccaagaaggccggggcgaagaaggcc
gccaagaaggcctga
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