Mycolicibacterium chubuense: Mycch_5390
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Entry
Mycch_5390 CDS
T02150
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mcb
Mycolicibacterium chubuense
Pathway
mcb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mycch_5390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcb03019
]
Mycch_5390
03110 Chaperones and folding catalysts [BR:
mcb03110
]
Mycch_5390
03029 Mitochondrial biogenesis [BR:
mcb03029
]
Mycch_5390
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcb04147
]
Mycch_5390
Enzymes [BR:
mcb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Mycch_5390
Messenger RNA biogenesis [BR:
mcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Mycch_5390
Chaperones and folding catalysts [BR:
mcb03110
]
Heat shock proteins
HSP60 / Chaperonin
Mycch_5390
Mitochondrial biogenesis [BR:
mcb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Mycch_5390
Exosome [BR:
mcb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mycch_5390
Exosomal proteins of other body fluids (saliva and urine)
Mycch_5390
Exosomal proteins of breast cancer cells
Mycch_5390
Exosomal proteins of colorectal cancer cells
Mycch_5390
Exosomal proteins of bladder cancer cells
Mycch_5390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF6381
Motif
Other DBs
NCBI-ProteinID:
AFM20067
UniProt:
I4BS10
LinkDB
All DBs
Position
pMYCCH.01:complement(54327..55919)
Genome browser
AA seq
530 aa
AA seq
DB search
MIAFNEEARRALQRGVDHLADAVKVTLGPKGRNVVLGRHLAKPVVTNDGVTVARSIELGD
PYEKMGAELVKAVAKQTDVVAGDGTTTATVLAQAMVREGLRNIAAGANPMAVRRGIAAGL
VNVVQAINDASTPVETPEQIAAAATISSGDPEIGSIVAAALDKVGVRGNITAEASDAIGL
SLELVEGLRFENGYLSPYFVTDFERLEVVLDNPYILFVSSVISSVRQLTPIVEKVMESGR
PLVIVAEDVTGDALATLVVNNVRGTFTSAAVKAPGFGDRRDLMLRDMAIVTGGEVISEAI
GVTVAATSLDLLGTARRVLITKSDTAIIGGAGNAAEIAGRVKEITTAIEAATDDYERDKL
QERLTKLSGAAAVIRIGAATEIELNERRHRLEDAVRNARAAAEEGVVAGGGVALLQASVT
AFDTLDLAADDAIGANVLRTSLHAPLKQIAVNAGLEGGVVVEKVRHLPIGHGLNAATGQY
GDMIAAGIMDPLKVTRLALENAASIAAIFLTAEVLIADKPHVPLSEMPPL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccttcaacgaggaagcccggcgggccttacagcggggggtggaccatctcgcc
gacgctgtcaaggtcacgctaggccccaagggccgcaatgtcgtgctcggtcgccacctc
gcgaaacccgtcgtgaccaacgatggtgtcaccgtcgcgcgcagtattgaactcggcgat
ccctacgaaaagatgggcgccgaactcgtcaaagcggtcgccaagcaaactgacgtcgtc
gccggtgatggtacgaccaccgccaccgtgctcgcccaggcgatggtccgcgagggcctg
cgtaatatcgccgccggcgccaaccccatggcagtcaggcgaggcatcgccgctggcttg
gtcaatgttgtccaggcgatcaacgatgcttcgacaccagtcgaaacccccgagcagatc
gcagcggccgcgacaatctcctcgggggatccggaaatcggaagcatcgtcgcggcagcg
ctagacaaggtcggtgtacgcggcaacatcaccgcagaggcatcggacgcgatcggcctc
tcgctcgagctcgtcgagggattgcgattcgagaatggctacctcagtccgtacttcgtg
accgatttcgaacgcctcgaggtcgtcctcgacaacccgtacattctgttcgtctcgtcg
gtgatcagctcggtccggcagctgacaccaatcgtggaaaaggtgatggaatccggtcgt
ccgctggtcatcgtggccgaagatgtcaccggcgatgcgctcgccaccctggtcgtcaac
aacgtgcgcggcaccttcacctcagcggcagtgaaggcgcccggtttcggcgaccgccgt
gatttgatgctgcgcgacatggccatcgtgaccggtggcgaagtcatttccgaagccatc
ggggtgaccgtcgcagccacgagcctcgatttgctcgggaccgcgcgtcgcgtgctgatc
accaaaagcgataccgccattatcggcggcgccggcaacgccgccgagatcgcgggacgg
gtcaaggaaatcaccaccgcgatcgaggcggcgaccgacgattatgaaagagacaaactt
caggaacgtttgacgaagctcagcggcgcggcagcggtgatccggatcggcgccgcaact
gagatcgaactcaacgaacgaagacatcgactcgaggacgctgtgcgtaacgcgagggcc
gccgcggaagaaggcgttgtggccggcggcggtgttgcgttgctgcaagcatccgtgacc
gccttcgacacgctcgatctcgctgccgatgatgcgatcggcgccaatgtcctgcggacg
tctcttcacgcaccgttgaaacagatcgccgttaacgccgggctagaaggcggggttgta
gtcgagaaggtaagacacctaccgatcgggcacgggctgaacgccgcgaccgggcagtac
ggcgacatgatagccgccggaatcatggatccgctcaaggtaacccgactagcgctcgaa
aacgcggcgtccatcgcggcgatattcctgaccgccgaggtgctcatcgccgataaacca
cacgttccactatcggaaatgccgccgctctga
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