Mycolicibacterium chubuense: Mycch_5612
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Entry
Mycch_5612 CDS
T02150
Name
(GenBank) RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
mcb
Mycolicibacterium chubuense
Brite
KEGG Orthology (KO) [BR:
mcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcb03021
]
Mycch_5612
Transcription machinery [BR:
mcb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mycch_5612
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
GerE
HTH_3
HTH_31
MarR
DUF7343
HTH_Crp_2
HTH_28
HTH_7
Phage_antitermQ
DUF1492
UPF0122
DUF134
Motif
Other DBs
NCBI-ProteinID:
AFM20259
UniProt:
I4BSK2
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All DBs
Position
pMYCCH.01:290053..290865
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AA seq
270 aa
AA seq
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MTAAGSPPLPAPSRPTGDDYADVTDMFRLLRALPADSSDFTRERDRIITRCLPLADRIAQ
RYHGKGESIDDLRQIARVGLLHAVNRFDPNNGAAFLSYAVPTILGEVRRYFRDHSWAMRV
PRRLKDLHVRIGQITPQLTQSLGHAPSPRDLATALDVSQDEVVECLIAASSYSLRSLDVP
TSEQIHGRSPLGDTFGELDRELDAITDRESLRPHLEALTDRQRAVLNLRFFAGMTQSQIA
EEMGCSQMHVSRILAATLRQLRRGVCDGTA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgccggctcccctccgttgcccgcgccatcccgacccaccggagacgactac
gccgacgtcactgacatgttccgcctgcttcgcgcactgcctgcagactcgtccgacttc
acgcgtgagcgcgaccgcatcatcactcgctgcttacccctggccgaccgcatcgctcag
cgctatcacggcaagggcgagagcatcgacgatctcaggcagatcgcccgcgtcgggctc
cttcatgccgtgaaccgcttcgacccgaacaacggcgccgcgtttctctcgtacgcggtc
ccgacaatactcggtgaggttcggcgttattttcgcgatcactcatgggccatgcgtgtc
ccccgccgcctaaaggacctgcatgtgcgcatcggccaaatcacaccgcagctgacgcaa
tcactcggacatgcgcccagcccccgcgatctggccacagcgctcgacgtgtcccaggac
gaagtcgtcgagtgcctgatcgccgccagctcgtacagcctccgctcgttggacgtcccg
acaagcgagcagattcacggcagatcgccgctcggcgacaccttcggcgaactggaccgg
gagttggacgccatcaccgaccgggaaagcctgcgcccccatttggaagccctcaccgat
cggcaacgcgcggtgctcaacttgagatttttcgccggaatgacgcagtcccaaatcgcg
gaggagatgggttgttctcagatgcacgtctctcgcattctggcagcgacgcttcggcag
ctgcggcgaggtgtgtgcgacggtacggcgtga
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