Macaca mulatta (rhesus monkey): 704086
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Entry
704086 CDS
T01028
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X5
KO
K04833
voltage-gated sodium channel type I alpha
Organism
mcc
Macaca mulatta (rhesus monkey)
Pathway
mcc04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
704086 (SCN1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcc04040
]
704086 (SCN1A)
Ion channels [BR:
mcc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
704086 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
704086
NCBI-ProteinID:
XP_001100928
Ensembl:
ENSMMUG00000008407
LinkDB
All DBs
Position
12:complement(53132437..53296293)
Genome browser
AA seq
1980 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCIQWPPTNASLEEHSVEKNITVNY
NGTLINETVFEFDWKSYIQDSRYHYFLEGFLDALLCGNSSDAGQCPEGYVCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMIEQLKKQQEAAQQAATATASEHSREPSAAGRLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLGTTTETE
MRKRRSSSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESRQKCPPCWYKFSNIFLIW
DCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNNVLTVGNLVFT
GIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRLLRVFK
LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIASDCQ
LPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFL
ALLLSSFSADNLAATDDDNEMNNLQIAVDRMHKGVAYVKRKIYEFIQQSFIRKQKILDEI
KPLDDLNNKKDSCMSNHTTEIGKDLDYLKDVNGTTSGIGTGSSVEKYIIDESDYMSFINN
PSLTVTVPIAVGESDFENLNTEDFSSESDLEESKEKLNESSSSSEGSTVDIGAPAEEQPV
VEPEETLEPEACFTEGCVQRFKCCQINVEEGRGKQWWNLRRTCFRIVEHNWFETFIVFMI
LLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLD
FLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIM
NVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTGDRFDIEDVNNHTDCLKLIERNETARW
KNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEESLYMYLYFVIFII
FGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGN
KFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSEYVTTILSRINLVFIVLFTGEC
VLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARIGRILR
LIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFE
TFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSSVKGDCGNPSVGIFFFVS
YIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKL
SQFAAALEPPLNLPQPNKLQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQ
MEERFMASNPSKVSYQPITTTLKRKQEEVSAVIIQRAYRRHLLKRTVKQASFTYNKNKIK
GGANLIKEDMIIDRINENSITEKTDLTMSTAACPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
5943 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcggctattgaaagacgcattgcagaagaaaaggctaagaatcccaaaccagac
aaaaaagatgacgacgaaaatggcccaaagccaaatagtgacttggaagctggaaagaac
cttccatttatttatggagacattcctccagagatggtgtcagagcccctggaggacctg
gacccctactatatcaataagaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaata
gctattaagattttggtacattcattattcagcatgctaattatgtgcactattttgaca
aactgtgtgtttatgacaatgagtaaccctcctgactggacaaagaatgtagaatacacc
ttcacaggaatatatacttttgaatcacttataaaaattattgcaaggggattctgttta
gaggattttactttccttcgggatccatggaactggctcgatttcactgtcattacattt
gcgtacgtcacagagtttgtggacctgggcaatgtctcggcattgagaacattcagagtt
ctccgagcattgaagacaatttcagtcattccaggcctgaaaaccattgtgggagccctg
atccagtctgtgaagaaactctctgatgtcatgatcctcactgtgttctgtctgagcgtg
tttgctctaattgggctgcagctgttcatgggcaacctgaggaataaatgtatacagtgg
cctcccaccaatgcttccctggaggaacatagtgtagaaaagaatataactgtgaattat
aatggtacacttataaatgaaaccgtctttgagtttgactggaagtcatatattcaagat
tcaagatatcattatttcctggagggttttttagatgcactactctgtggaaatagctct
gatgcaggccagtgtccagagggatatgtgtgtgtgaaagctggtagaaatcccaattat
ggctacacaagctttgataccttcagttgggcttttttgtccttgtttcgactaatgact
caggacttctgggaaaatctttatcaactgacattacgtgctgctgggaaaacatacatg
atattttttgtgttggtcattttcttgggctcattctacctaataaatttgatcctggct
gtggtggccatggcctatgaggaacagaatcaggccaccttggaagaagcagaacagaaa
gaggccgaatttcagcagatgatcgaacagcttaaaaagcaacaggaggcagctcagcag
gcagcgacagcaactgcctcagaacattccagagagcccagtgcagcaggcaggctctca
gacagctcatctgaagcctctaagttgagttccaagagtgctaaggaaagaagaaatcgg
aggaagaaaagaaaacagaaagagcagtctggtggggaagagaaagatgaggatgaattc
cataaatctgaatctgaggacagcatcaggaggaaaggttttcgcttctccattgaaggg
aaccggttgacgtatgaaaagaggtactcttccccacaccagtctttgttgagcatccgt
ggctccctattttcaccaaggcgaaatagcagaacaagccttttcagctttagagggcga
gcaaaggatgtgggatctgagaatgactttgcagatgatgagcacagcacctttgaggac
aatgagagccgtagagattccttgtttgtgccccgacgacatggagagcgacgcaacagc
aacctgagtcagaccagtaggtcatcccggatgctggcagtgtttccagcgaatgggaag
atgcacagcactgtggattgcaatggtgtggtttccttgggaacaaccactgaaactgaa
atgagaaagagaaggtcaagttctttccatgtttccatggactttctagaagatccttcc
caaaggcaacgagcaatgagtatagccagcattctaacaaatacagtagaagaacttgaa
gaatccaggcagaaatgtccaccctgttggtataaattttccaacatattcttaatctgg
gactgttctccatattggttaaaagtgaaacatgttgtcaacctggtcgtgatggaccca
tttgttgacctggccatcaccatctgtattgtcttaaatacccttttcatggccatggag
cactatccaatgacggaccatttcaataatgtgcttacagtaggaaatttggttttcact
gggatctttacagcagaaatgtttctgaaaattattgccatggatccttactattatttc
caagaaggctggaatatctttgatggttttattgtgacgcttagcctggtagaacttgga
ctcgccaatgtggaaggattatctgttctccgttcatttcgattgctgcgagttttcaag
ttggcaaaatcttggccaacgttaaatatgctaataaagattattggcaattccgtgggg
gctctgggaaatttaacccttgtgttggccatcatcgtcttcatttttgccgtggttggc
atgcagctctttggtaaaagctacaaagattgtgtctgcaagatcgccagtgattgtcaa
ctcccacgctggcacatgaatgacttcttccactccttcctgattgtgttccgcgtgctg
tgtggggagtggatagagaccatgtgggactgtatggaggttgctggtcaagccatgtgc
cttaccgtcttcatgatggtcatggtgattggaaacctagtggtcctgaatctctttctg
gccttgcttctgagctcatttagtgcagacaaccttgcagccactgatgatgataatgaa
atgaacaatctccaaattgctgtggataggatgcacaaaggagtagcttatgtgaaaaga
aaaatatatgaatttattcaacagtccttcattaggaaacaaaagattttagatgaaatt
aaaccacttgatgatctaaacaacaagaaagacagttgtatgtccaatcatacaacagaa
attgggaaagatcttgactatcttaaagatgtaaatggaactacaagcggtataggaact
ggcagcagtgttgaaaagtacattattgatgaaagtgattacatgtcattcataaacaat
cccagtcttactgtgactgtaccaattgctgtaggagaatctgactttgaaaatttaaac
acggaagactttagtagtgaatcggatctggaagaaagcaaagagaaactgaatgaaagc
agtagctcctcagaaggtagcactgtggacatcggcgcacctgcagaagaacagcccgta
gtggaacctgaagaaacccttgaaccggaagcctgtttcactgaaggctgtgtacaaaga
ttcaagtgttgtcaaatcaatgtggaagaaggcagaggaaaacaatggtggaacctgaga
aggacgtgtttccgaatagttgaacataactggtttgagaccttcattgttttcatgatt
ctccttagtagcggtgctctggcatttgaagatatatatattgatcagcgaaagacgatt
aagacaatgttggaatatgctgacaaggttttcacttacattttcattctggaaatgctt
ctaaaatgggtggcatatggctatcaaacatatttcaccaatgcctggtgttggctggac
ttcttaattgttgatgtttcactggtcagtttaacagcaaatgccttgggttactcagaa
cttggagccatcaaatctctcaggacactaagagctctgagacctctaagagccttatct
cgatttgaagggatgagggtggttgtgaatgcccttttaggagcaattccatccatcatg
aatgtgcttctggtttgtcttatattctggctaattttcagcatcatgggcgtaaatttg
tttgctggcaaattctaccactgtattaacaccacaactggtgacaggtttgacatcgaa
gacgtgaataatcatactgattgcctaaaactaatagaaagaaatgagactgctcgatgg
aaaaatgtgaaagtaaactttgataatgtaggatttgggtatctctctttgcttcaagtt
gccacatttaaaggatggatggatataatgtatgcagcagttgattccagaaatgtggaa
ctccagcctaagtatgaagaaagtctgtacatgtatctttactttgttattttcatcatc
tttgggtccttcttcaccttgaacctgtttattggtgtcatcatagataatttcaaccag
cagaaaaagaagtttggaggtcaagacatctttatgacagaagaacagaagaaatactat
aatgcaatgaaaaaattaggatcgaaaaaaccgcaaaagcctatacctcgaccaggaaac
aaatttcaaggaatggtctttgacttcgtaaccagacaagtttttgacataagcatcatg
attctcatctgtcttaacatggtcacaatgatggtggaaacagatgaccagagtgaatat
gtgactaccattttgtcacgaatcaatctggtgttcattgtgctgtttactggagagtgt
gtactgaagctcatctctctacgccattattactttaccattggctggaatatttttgat
tttgtggttgtcattctctccattgtaggtatgtttctggccgagctgatagaaaagtat
ttcgtgtcccctaccctgttccgagtgatccgtcttgccaggattggccgaatcctacgt
ctgatcaaaggagcaaaggggatccgcacgctgctctttgctttgatgatgtcccttcct
gcgttatttaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttggg
atgtctaactttgcctatgttaagagggaagttgggatcgatgacatgttcaactttgag
acctttggcaacagcatgatctgcctgttccaaattacaacctctgctggctgggatgga
ttgctagcacccattctcaacagtaagccacccgactgtgaccctaataaagttaaccct
ggaagctcagttaagggagattgcgggaacccatctgttggaattttcttttttgtcagt
tacatcatcatatccttcctggttgtggtgaacatgtacatcgcggtcatcctggagaac
ttcagtgttgctactgaagaaagtgcagagcctctgagtgaggatgactttgagatgttc
tatgaggtttgggagaagtttgatcccgatgcaactcagttcatggaatttgaaaaatta
tctcagtttgcagctgcacttgaaccgcctctcaatctgccacaaccaaacaaactccag
ctcattgctatggatttgcccatggtgagtggtgaccggatccactgtcttgatatctta
tttgcttttacaaagcgggttctaggagagagtggagagatggatgctctacgaatacag
atggaagagcgattcatggcttccaatccttccaaggtctcctatcagccaatcactact
actttaaaacgaaagcaagaggaagtatctgctgttattattcagcgtgcttacagacgc
caccttttaaagcgaactgtaaaacaagcttcctttacatacaataaaaacaaaatcaaa
ggtggggctaatcttataaaagaagacatgataattgacagaataaatgaaaactctatt
acagaaaaaactgatctgaccatgtccactgcagcttgtccaccttcctatgaccgggtg
acaaagccaattgtggaaaaacatgagcaagaaggcaaagatgaaaaagccaaagggaaa
taa
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