Macaca mulatta (rhesus monkey): 705887
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Entry
705887 CDS
T01028
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
mcc
Macaca mulatta (rhesus monkey)
Pathway
mcc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
705887 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcc04121
]
705887 (SLX4)
03400 DNA repair and recombination proteins [BR:
mcc03400
]
705887 (SLX4)
Ubiquitin system [BR:
mcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
705887 (SLX4)
DNA repair and recombination proteins [BR:
mcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
705887 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
705887
NCBI-ProteinID:
XP_014980910
Ensembl:
ENSMMUG00000007574
LinkDB
All DBs
Position
20:complement(3623104..3652292)
Genome browser
AA seq
1785 aa
AA seq
DB search
MDESDEDFKELCASFFQRVKKHGIKEVSGERKTQNASSNGTQVRRKLKRTKQTATKTKTL
QGPAEKKPPSGSQAPRTKKQGVTKWQASEPALSVNGEAGVLASAPDQPVLWETAQNTQTG
NRQEPSPNLSKEETTENAPNSDSQPPPSCLTTAVPSPSKPRTAQLVLQRMQQFKRADPER
LRHASEECSLEAAQEENVPKDPQEEMMARNVFGLGPPAPESDAVVALTLQQEFARVGASA
HDDSLEEKGLFFCQICQKNLSAMNVTRREQHVNRCLDEAEKALRPSVPQIPECPICGKPF
LTLKNRASHLKQCAVKMEVGPQLLLQAVRLQTAQPEGSSSLPVSSDHGGGLKRRGPASKK
EPRKRRKVDEAPSEDLLVAMALSRSEMEPCAAVPALRLESAFSERIKPEAEKKSRKKKPP
VSPPLLLVQDSETTGRQIEDRVALLLSEEVELSSTPPLPASRILKEGWERAGQCPPPPEC
KQSFLWEGSALTGAWATEAFYTARLVPPLVPQRPAQGLMQEPVLPLVPPEHSERRSPALH
GTPPAGCGSRGPSPSASQREQQALQDLVDLAREGLSASPWPSSGGLAGSEGAAGLDVVPG
GLPLTGFVVPSQDKHPERGGRTSLSLGLLVADFGAMVNNPHLSDVQFQTDSGEVLYAHKF
VLYARCPLLIQYVNKEGFSAVEDGILTQRVLLGDVSTEAACAFLHYLYTADTGLPPGLSS
ELSSLAHRFGVSELVHLCEQVPVTTDSGGKPWEEKEAENCESRAENFQELLRSMWADEEE
EAETLLKSKDHEEDQENVNEAEMEEIYEFAATQRKLLQEEKAVGAGEDADWLEGGSPVSG
QLLASVQVQEQSDKVEEMEPSEPGRDEATTTWEKVGQCPLPPPQGQRSGAWGAEAPEQEA
LGRSSCSTPSRGCRAERKEGPLPHSDGAGDYEQLFSSTQGEISELSRVTSEPEERSGTVR
ERGLEVSHRLAPWQVSPPHPCRFLLGPPQGRSPRGSHQPHRTSGLPLSTPRSRGGTSQVG
SPTSLSPAVPSKQKRDRSVLTLSKEPGHQKGTERRSMLECRNKGVLMSPEKSLSIDLTQS
NPDHLSSTSQKSPSKVNKDDEVILLLDSDEELELEQTKMKSISSDPLEERKALEISARSC
ELFSVIDVDADQERSHSPPRKEAALQREDEGALPENRGSLGSRGAPWLFCDRESSPGEGS
TTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVEVVTQHTPRASVGNREGNEAAQKFS
IIRPQTPPPQTPSSCLTPVSPGTSDGRRQGHKSPSRPHPGGHPHSSPLAPRPISGDCAHF
SRRFLKHSPPGPSFLNQTTASEVVEVGDSDDEQEVASHQANSSPPLDSDPPIPVDDCCWQ
MEPLSPIPIDHWNLERTGPLSTSSPSRRMKEAADSCDCRSPGLLDTTPIRGSCAARRKSQ
VGAGSPGNSRLSFLNSALWDDWDGEEQRPPETPPLAQMLSVGGAQKPEGLETPKGVHRKK
DLPPKVPITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTVDSDSED
ESQSSQPLLQAPRCQTLASQTYKPSRAGAHAQQEATTGPGTHRPKGPAKTKGPQHQRNHH
ESIAPAPPSRSPTKEAPPGLDDDAQLPASQESVATSVDGSDSSLSSQSSSSCEFGAAFES
AGEEEEGEEEVSASQAAVQAADTDEALRCYIRSKPALYQKVLLYQPFELGELQAELKQNG
LRVSSRRLLDFLDTHCITFTTAAARREKLQGRRRWPRSKKKAARN
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctgatgaggactttaaagaactctgcgctagctttttccaaagggtgaaa
aaacatggaatcaaggaagtgtcaggagaaaggaagacacaaaacgcctcctcaaacggc
actcaggtaagacgcaaattgaaaaggaccaaacaaactgctaccaagaccaaaaccctt
caaggccctgcagagaagaaacctccatctggcagccaggcccctaggactaaaaagcaa
ggggtaaccaaatggcaagcaagtgaaccggccctctctgtgaatggggaggcgggtgtg
ctcgcctctgctccagatcaacctgtgctctgggaaacagcacaaaacacccagacgggt
aaccggcaagaaccatcgccaaacctttccaaagaggaaaccacagagaatgcgcctaac
agcgactctcagcctcctccttcctgtttgacaacagcagtgccaagtccctccaaaccc
cgcacagcacaattggtcctacagcgaatgcagcagttcaagagagcagaccccgagcgt
ttgagacatgcttcagaagagtgctccctcgaggctgcacaggaagaaaacgtcccaaag
gatcctcaagaggagatgatggcgaggaatgtgtttgggcttgggccccctgccccagag
agcgacgctgtggtggccttgaccctgcagcaggagtttgcacgggtaggagcatcggca
catgatgatagcctggaggaaaaagggttgttcttctgccagatttgtcaaaagaacctc
tcagccatgaacgtgacccgaagggaacagcatgtaaacaggtgcctggatgaagctgaa
aaggcactaagaccttccgtgcctcagatccctgagtgcccgatttgtgggaaaccgttt
ctgaccttaaagaacagagccagccacttgaagcagtgtgctgtgaagatggaggttggc
ccccagctcctgctgcaggccgtccggctgcagacagcacagcctgaggggagcagcagc
ctgcccgtgtccagtgatcacggtggaggtctgaaacggagaggacccgccagcaagaag
gagccacggaagaggcggaaggtggacgaggcaccgtccgaggacctgctggtggccatg
gctctgtcccggtcggagatggagccgtgtgcggctgtgccagcgctcaggctggaaagt
gccttttctgagaggataaaaccagaagcagagaagaaaagtcgcaagaagaaaccccca
gtgtctcccccattgttgttagtccaggactctgaaaccacaggccgacagatagaggac
cgtgtggccctgctcctgtctgaggaagtggaattgtctagcacgccaccacttcctgcc
agcaggattttaaaggaagggtgggaaagagcgggccagtgtcctcctccacctgaatgc
aagcagagctttctgtgggagggcagtgcactgactggggcctgggccacggaggccttc
tacacggccaggctggtccctcccctcgtgccccagcggcctgcccagggcctcatgcag
gagcctgtgctgccgctggtgccacctgagcactcagaacgaaggtcacccgctctccac
ggcacaccccctgcaggctgtggctccaggggaccgtcgccttcggccagccagagggag
cagcaggccctgcaggacctcgtggacctggcgagggagggactgagcgccagcccgtgg
cccagcagtgggggcctggctggctcggaaggggctgcagggttggacgtggtgcccggc
ggccttcctctgactgggtttgtggtgccatcgcaggacaagcacccagaaaggggcggc
cgcacctcgctctcccttgggctgctggttgctgactttggtgccatggtcaataaccca
cacctgagtgatgtccagttccagacagacagcggggaggtgctttacgcccacaagttc
gtgctttatgcccgatgcccgctcctcatccagtatgtgaacaaagaaggcttctccgct
gtagaggacgggattctgacccagcgtgtcctgctgggtgacgtgagcactgaggccgcc
tgcgcattcctgcactacctctacaccgcggacactggccttcctcctggcctgagctct
gagctgagttccctggcccacaggtttggtgtgagtgagcttgttcacctgtgcgaacag
gtgcctgtcaccacggactcagggggcaaaccatgggaggagaaggaagccgagaattgc
gaaagcagggccgagaatttccaggaactcttgaggtcaatgtgggcagatgaagaggag
gaagcggagactttgttgaaatccaaggaccacgaagaagatcaagaaaacgtgaatgaa
gcagaaatggaagaaatttatgaattcgcagctactcagcgaaagctgctccaggaagaa
aaagcagtgggtgctggcgaggatgctgactggctggagggtggcagtccggtttctggg
cagctcctagcaagtgtccaggtgcaggaacagtcggacaaggtggaggagatggagccg
tcggagccaggaagagatgaggccaccaccacctgggagaaggtgggacagtgccctctc
ccaccaccccagggccagcgctcaggggcatggggagcagaggcccccgagcaggaggcg
cttggccgttccagttgctccaccccttccaggggctgccgcgcagagagaaaagaaggc
ccccttccgcactcggatggtgccggtgattacgaacagctcttctcatcaactcaggga
gagatctcagagctgtcccgagtaacaagtgagcctgaggaacgaagtggcactgtcagg
gaaagggggctggaggtttctcatcgcctggctccctggcaggtgtctccaccacacccg
tgccgcttcctactggggcctccccagggcaggagtccccgcgggtctcatcagcctcat
cgcacaagcgggttgcccctgtcaacaccccggtcccgtggcggaacttcccaggtgggc
tccccaacctcgctgtctccagctgtgccatcaaagcagaaaagggacaggagcgtcctc
acgctgtctaaagagccaggccaccagaaaggcacagagcgtcgctccatgctggagtgc
agaaataagggggtcctgatgtccccagaaaaatctctgtccattgacctaacccagtca
aatcctgaccatttgagctccacgtctcagaagtctccatccaaagtgaacaaagacgac
gaggtcatcctcttactggactcggatgaggagctagagctagaacaaaccaaaatgaag
tccatttctagtgatcctctggaagaaaggaaagctctagaaattagcgctaggtcctgt
gagctgttttccgtcattgacgtcgatgcagatcaggaacgttcccacagcccaccaaga
aaggaagctgcgctgcagcgggaggatgagggggcgctgccggagaaccggggctctttg
ggcagcagaggggctccctggctgttctgcgaccgtgagagcagccccggcgagggcagc
accacagacacctcatggctggtgcccgccaccccgctggccagcagaagccgcgactgt
tcttcccagacccaaatcagcagcctcaggagcgggctggccgtggaggtggtgacacag
cacacgcccagggcctcggtaggaaacagggaagggaacgaggctgcacagaagttttcc
atcatcaggccccagacaccaccgccccagacaccgtcctcctgcctcactcccgtctct
ccaggaacttctgacggcagaaggcaaggccacaaaagcccttcccgtccccaccctggg
ggccacccgcactcctctccgctggctccacgtcccatctcaggggactgtgcccacttc
agcaggcggttcctgaaacactcgccacctgggccaagcttcctgaaccagaccacagcg
agtgaagtggtggaagtcggggacagtgacgatgagcaggaggtggcctcccatcaggcc
aacagcagccccccgctggacagtgaccctccaattccagtcgacgactgctgctggcag
atggagcccctctcgccaattcccattgatcactggaacctggagcggaccggccccctg
agcaccagcagccccagccgcaggatgaaggaggccgccgacagctgtgactgccgctcc
ccgggactcctggacaccacccccatccgaggaagctgcgctgcccggaggaaatcgcaa
gtgggcgcgggttccccggggaacagcaggctgagctttctgaattcggctctgtgggac
gattgggacggggaagagcagaggcctccagagacccctcctctagcgcagatgctaagc
gtcggtggagctcagaagcccgaagggttagagacacccaaaggtgtacatcggaagaag
gacttgcctcccaaagtgcccataacaccgatgccacagtattccattatggagacgccg
gtgctgaagaaggaactggataggtttggagtccgccctctgcctaaacgccagatggtt
ctgaagctgaaggagatattccagtacactcaccagaccgtggactcagactctgaggat
gagagccagtcctcacagccgctactgcaggcgcctcgctgccagaccctcgcctcccag
acctacaagccttcaagggcaggggcccatgcccagcaggaggccaccacaggacctggg
acccataggcccaagggacctgctaagaccaagggcccccaacatcaaaggaatcatcat
gaaagcatcgcacccgcacccccaagcaggtcgcccaccaaggaggcacctccaggcctt
gatgatgatgcccagctcccagcctcccaggaatccgtggccacttctgtggacggcagt
gacagctccttgagctcacagagttcttcctcctgtgagtttggagcggcatttgagtct
gcaggtgaagaggaggagggtgaggaggaggtcagcgcctcacaggcagccgtgcaggcg
gcggacacggacgaggcgctgagatgctacatccgctccaagccggccctgtaccagaag
gtgctgctgtaccagccctttgagctgggggagctgcaggcggagctgaagcagaacggc
ctccgtgtatcctcgcgcaggctactggacttcctggacacccattgtatcaccttcacc
accgccgctgcccgcagggagaagctccagggcaggaggcggtggcctcggagcaagaag
aaggcggcgcggaactga
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