Macaca mulatta (rhesus monkey): 706419
Help
Entry
706419 CDS
T01028
Symbol
MTREX
Name
(RefSeq) exosome RNA helicase MTR4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
mcc
Macaca mulatta (rhesus monkey)
Pathway
mcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
706419 (MTREX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcc03019
]
706419 (MTREX)
03041 Spliceosome [BR:
mcc03041
]
706419 (MTREX)
03009 Ribosome biogenesis [BR:
mcc03009
]
706419 (MTREX)
03016 Transfer RNA biogenesis [BR:
mcc03016
]
706419 (MTREX)
Enzymes [BR:
mcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
706419 (MTREX)
Messenger RNA biogenesis [BR:
mcc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
706419 (MTREX)
Spliceosome [BR:
mcc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
706419 (MTREX)
Complex C
U4/U6.U5 tri-SnRNP related factors
706419 (MTREX)
Ribosome biogenesis [BR:
mcc03009
]
Eukaryotic type
Pre-60S particles
Helicases
706419 (MTREX)
Transfer RNA biogenesis [BR:
mcc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
706419 (MTREX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
706419
NCBI-ProteinID:
XP_014995564
Ensembl:
ENSMMUG00000010379
LinkDB
All DBs
Position
6:53609918..53736192
Genome browser
AA seq
1042 aa
AA seq
DB search
MADAFGDELFSVFESDSTNEAGTKKDKEKDKGKWKGPPGSADKAGKRFDGKLQSESTNNG
KNKRDVDFEGTDEPVFGKKPRIEESITEDLSLADLMPRVKVQSVETVEGCTHEVALPADE
DYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALR
EKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGS
EVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLH
KQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLREAGDLAKGD
QKGRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMV
EEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALF
ATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVD
EKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPG
VVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLV
KVKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKP
DEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGIPLLDPI
DDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELK
KARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDL
SAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLS
SFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELE
NKFAEGITKIKRDIVFAASLYL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcattcggagatgagctgtttagcgtgttcgagagcgactcgaccaatgag
gcgggaaccaaaaaagacaaggaaaaggacaaggggaaatggaaggggcctccagggtct
gcagacaaggcagggaaacgttttgatggtaaattacaatcagaatcaactaataatgga
aaaaataagagggatgtagatttcgaaggtacagatgaacccgtttttggaaagaagccc
aggatagaagagtcaataactgaagacttaagtttggcagacctgatgcccagagtcaag
gtacaatcagttgaaactgttgaagggtgtacacatgaggttgcgcttcctgcagatgaa
gattatttaccacttaaacctcgagttggaaaagctgctaaggaatacccattcattctt
gatgcttttcaaagagaagccattcagtgtgttgacaataatcagtctgttctagtatct
gcacatacatcagcgggaaaaacagtatgcgccgagtatgccatcgcattggccttaagg
gaaaagcagcgtgtaatatttaccagcccaattaaggctctgagtaaccaaaaataccgt
gaaatgtatgaagaatttcaagacgttggtttgatgactggtgatgttactattaatcct
acggcatcttgtcttgttatgaccacagagattttgagaagtatgctttacagaggttct
gaagttatgcgagaagttgcttgggttatatttgatgaaattcattatatgagagattca
gaacgtggtgtagtatgggaagaaactattattttgcttcctgataacgtccactatgtc
tttctttcggctactattccaaatgcccgacagtttgctgaatggatttgccatttacat
aaacagccttgtcatgtaatttacacagattatcggcccactccattgcaacactacatt
tttccagcagggggagatggcctgcatcttgtggttgatgaaaatggtgacttcagagaa
gataattttaatactgcaatgcaagtgcttcgagaagcaggtgatttggccaaaggagac
cagaaagggcggaaaggaggaacaaaaggaccatcaaatgttttcaaaattgtgaagatg
attatggaaagaaatttccaacctgtgattattttcagttttagtaagaaagattgtgaa
gcctatgcacttcaaatgaccaaattagatttcaacacagatgaagaaaagaagatggtt
gaagaagtattcagtaatgcaattgattgcttatccgatgaagataaaaaactccctcag
gtagaacatgtacttcctcttttgaagaggggaattggtattcaccatggtggtttactt
cctattttgaaagaaactatagaaattctcttttctgaaggattgataaaggccttattt
gccacggagacttttgctatgggaattaacatgccagctagaactgttttatttacaaat
gcccgcaaatttgatgggaaggatttccggtggatttcttctggtgaatacattcagatg
tctggtcgtgctggaaggagaggaatggatgatagaggaattgtaattcttatggtagat
gaaaagatgagcccaacaattggaaaacaattacttaagggctccgctgatcctctaaat
agtgctttccatttgacctacaacatggttttgaacttactacgtgtagaagaaattaat
cctgagtacatgttggaaaaatccttctatcagtttcagcattatcgagcaattccagga
gtagtagagaaggtaaagaattcagaagaacagtataataaaatagtaattcccaatgaa
gaaagtgtggttatctattataagattagacagcagcttgccaaattgggtaaagaaatt
gaagaatatattcacaaaccaaaatactgcttaccttttctacaaccaggtcgtttggta
aaggtaaagaatgaaggggatgactttggctggggagtagtggtgaatttctcaaaaaag
tcaaatgttaagcctaactctggtgaactggatcctttgtatgtagtagaagtacttctt
cgctgtagcaaagagagcttgaaaaattcagctacagaagctgcaaaaccagctaaacct
gatgagaaaggagagatgcaggttgtcccagttttggtgcatctcctgtctgctatcagc
agtgttaggctttacattcctaaagaccttcggccagtggacaatagacagagtgtttta
aaatcaatacaggaagttcagaaacgttttcctgacggcatccccttattagaccctatt
gatgatatgggcattcaagatcaagggctgaaaaaagtcattcagaaagtagaagctttt
gagcatcgaatgtattctcatccacttcacaatgatccaaatttggaaactgtgtatacg
ctttgtgaaaaaaaagcacagattgcaatagatattaaatctgcaaagcgagaactgaag
aaagcgagaacagtcctacaaatggatgaactcaaatgtcgcaaacgtgttttaagaagg
ttgggatttgctacttcttctgatgtaatagagatgaaaggacgagtggcctgtgagata
agcagtgctgatgagctccttctaactgagatgatgtttaatggccttttcaatgacctt
tctgcagaacaggcaacagcattattaagctgctttgtgtttcaagagaattctagtgag
atgcccaaattaacagaacaattagcaggaccacttcgtcaaatgcaggaatgtgctaaa
agaatcgcaaaagtttcagcagaagccaaattggaaattgatgaggaaacttatctaagc
tcatttaaacctcacttaatggatgtagtatatacctgggcaactggagctacatttgcc
catatctgcaaaatgacagatgtctttgaaggcagcataattcgttgtatgaggcgccta
gaagaattgcttcgacaaatgtgtcaagcagcaaaagccattggaaacactgagctggaa
aataaatttgcagaaggaatcaccaaaatcaagagagatattgtgtttgctgccagcctc
tacttgtag
DBGET
integrated database retrieval system
