KEGG   Macaca mulatta (rhesus monkey): 707791
Entry
707791            CDS       T01028                                 
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
mcc  Macaca mulatta (rhesus monkey)
Pathway
mcc04140  Autophagy - animal
mcc04142  Lysosome biogenesis
mcc04148  Efferocytosis
mcc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mcc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    707791 (VPS39)
   04140 Autophagy - animal
    707791 (VPS39)
   04148 Efferocytosis
    707791 (VPS39)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    707791 (VPS39)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcc04131]
    707791 (VPS39)
Membrane trafficking [BR:mcc04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    707791 (VPS39)
SSDB
Motif
Pfam: Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin LIF1_N Beta-prop_RIG_2nd VPS18_solenoid_2nd DUF4145 KCTD11_21_C Beta-prop_WDR36-Utp21_1st Lgl_C EcoR124_C
Other DBs
NCBI-GeneID: 707791
NCBI-ProteinID: NP_001253369
Ensembl: ENSMMUG00000014511
UniProt: I0FH39
LinkDB
Position
7:complement(18647358..18694392)
AA seq 875 aa
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGE
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQRLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLAVPYLEHIIHVW
EETGARFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRQKLLMFLEIS
SYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDQNK
DGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLELHHSKLDTTKALNLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq 2628 nt   +upstreamnt  +downstreamnt
atgcacgacgctttcgagccagtgccgatcctagaaaagctgcctcttcaaatcgactgt
ctcgctgcctgggaggaatggcttcttgtgggaaccaaacaaggacatcttcttctctat
aggattcggaaggacgttggttgcaacagatttgaagtgacactagagaaatccaataag
aacttctccaaaaaaattcagcagatccatgtggtttcccagtttaagattctggtcagc
ttgttagaaaataacatttatgtccatgacctattgacatttcaacaaatcactacggtt
tcaaaggcaaagggagcatcactgtttacgtgtgacctccagcacacagagaccggtgag
gaggtgttgcggatgtgtgtggcagtaaaaaagaagctgcagctctatttctggaaggac
agggaatttcatgaattgcagggggactttagtgtaccagatgtgcccaagtccatggcg
tggtgtgaaaattctatctgtgtgggtttcaagagagactactacctaatacgggtggat
ggaaaggggtccatcaaagagctctttccaacaggaaaacagctggagcccttagttgca
cctctggcagatggaaaagtggctgtgggccaggatgatctcaccgtggtactcaatgag
gaagggatctgcacacagaagtgtgccctgaactggacggacatacccgtggccatggag
caccagcctccctacatcattgcagtgttgcctcgatacgtggagatccgaacatttgaa
ccgaggcttctggtccagagcattgaattgcaaaggccccgtttcattacctcaggagga
tcaaacattatctatgtggccagcaatcattttgtttggagactcatccctgtcccgatg
gcaacccaaatccaacaacttctccaggacaagcagtttgaattggctctgcagctcgca
gaaatgaaagatgattccgacagtgaaaagcaacaacagattcatcacatcaagaacttg
tatgctttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaaa
cttggcacagatcccacccacgtgatgggcctgtacccggacctgctgcccacagactac
aggaagcagttgcagtatcccaacccactgcctgtgctctctggggctgaattggagaag
gctcacttagctctgattgactacctgacacagaaacgaagtcaattggtaaagaagctg
aacgactctgatcaccagtcaagcacctccccactcatggaaggcactcccaccatcaaa
tccaagaagaagctgctacaaatcatcgacaccaccctgctcaagtgctatctccatacg
aacgtggccctggtggcccccttgctacgcctggagaacaatcactgccacattgaggag
agcgagcacgtgctgaagaaggctcacaagtacagtgagcttatcatcctgtatgagaag
aaggggctccacgagaaagctctgcaggtgctcgtggaccagtccaagaaagccaactcc
cctctgaaaggccacgagaggacagtgcagtatctgcagcgtctgggcacagaaaacctg
catttaattttctcctactctgtgtgggtgctgagagacttcccagaagatggcctgaag
atatttactgaagatctcccagaagtggagtctctgccacgtgatcgagtcctcggcttc
ttagtagagaattttaagggtctggctgttccttatctggaacacatcatccacgtttgg
gaggagacaggagctcggttccacaactgcctgatccagctgtactgtgaaaaggtgcaa
ggtctgatgaaggagtacctcctgtccttccccgcaggcaaaaccccagtcccagctgga
gaggaagagggcgaactgggagaataccggcaaaagctcctcatgttcttggagatttcc
agctactatgatccgggccggctcatctgtgattttccctttgatggcctcttagaagaa
cgagctctcctgttggggcgcatggggaaacacgaacaagctcttttcatttatgtccac
atcttgaaggatacaaggatggctgaggagtactgccacaaacactatgaccaaaacaaa
gatggcaacaaagatgtgtatctgtccctgcttcggatgtacctgtcgccccccagcatt
cactgcctggggccaatcaagctggaactgctggagccaaaagccaacctccaggctgcc
ctgcaggtcctggagctgcaccacagcaaactggacaccaccaaggccctcaaccttctg
ccagcaaacactcagatcaatgacatacgcatcttcctggaaaaggtcttggaagaaaat
gcacaaaagaaacggttcaatcaagtgctcaagaaccttctccatgcagagttcctgagg
gtccaggaagagcggattttacaccagcaggtgaagtgcatcatcacagaggagaaggtg
tgcatggtgtgtaagaagaagattgggaatagtgcatttgcaagataccccaatggagtg
gtcgtgcactacttctgttccaaagaggtaaacccagctgacacttga

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