Macaca mulatta (rhesus monkey): 707835
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Entry
707835 CDS
T01028
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mcc
Macaca mulatta (rhesus monkey)
Pathway
mcc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
707835 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcc03019
]
707835 (PNLDC1)
Enzymes [BR:
mcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
707835 (PNLDC1)
Messenger RNA biogenesis [BR:
mcc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
707835 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
707835
NCBI-ProteinID:
XP_014993114
Ensembl:
ENSMMUG00000004181
UniProt:
F6X2Q9
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All DBs
Position
4:complement(10778964..10805689)
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AA seq
569 aa
AA seq
DB search
MDLGADEFEESLPLLQELVQEADFVGLDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQS
VQQFTICQIGLSVFSAIEGEANKYIAHSCNFFLFPTTFGILDSEFSFQASSVQFLNQYGF
NYNKFLKNGIPYMNEEQEKKIRHDILTGNWRVRSSPDKDQIKAVIDKVTRWLDLAKEGDW
MTLPGIAGFQAFEVQLVLRQALPDIWTVLKDEGVVVKKVSKQHRWYLQNTSCDRESCWKE
KILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHSLFPV
LIDTKNVTKDIWKEMNFPRVSNLSEVYEVLNSDLNPTKNSGPEIVHASRCEKYVKTKCPH
EAAYDAFLCGSVLLKVAHLLLQKIHGGCYKYKRSVTHGWEAYFLNKKCASLTLFLVVWLF
MGPCIDPVPESSFPQYLDVLAPYVNQVNLIRAGVPKINFSGPDYPSIRPPILILSIKRWP
GVSEQQVYHKFQNLCKFDVRRLTRSQFLLLTNKFKDARNVLKEYRGHPTLCISLYRYWRH
SPDVNCVLQVCGIVTAWALLAFIFGRSGP
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggacttgggcgccgacgagttcgaggagagccttcctctgctgcaggagctcgtccag
gaggcggacttcgtgggtctggacatagagttcacgggccttcgatccaacctgtctgga
ccccagcagatcagtctttttgatttgccatcggagtggtacctaaagacccgtcagagc
gttcagcaatttacaatctgtcagattggattgtctgtgttttctgctattgaaggagaa
gcaaacaagtatatagcccattcgtgtaacttttttctcttccccacaacgtttgggatt
ttggactcagaattctctttccaggcttccagtgttcagtttttgaatcagtatggcttc
aactataacaagtttctcaaaaacggaatcccatatatgaatgaagaacaggagaagaaa
attcgacacgatatcctgactgggaactggagagtccgcagctctccagataaagaccaa
atcaaggcggtgattgacaaagtgacacggtggctggacctggccaaggaaggtgactgg
atgactcttcctgggatcgctggcttccaggcctttgaggtccaactggtgctgaggcag
gccctccccgacatctggacggtgctgaaagatgagggggtggtagtgaagaaagtgagt
aaacaacatcgctggtatcttcagaacacctcttgtgaccgagagagctgttggaaggaa
aagattcttctctctgcaaggggtttttctgtctttttccaaatgctggtgaaagcccag
aagcccttagtgggacataatatgatgatggacctgctgcacctccatgagaagttcttc
agacccctcccagaaagctacgatcaatttaagcagaatatccacagcctatttcctgtt
ctcattgacaccaagaatgtaacaaaggatatctggaaggagatgaatttcccgagggtg
tcgaatctttccgaagtctatgaagtcctgaacagtgacttgaatcccaccaagaattct
ggaccagagattgttcacgcaagcaggtgtgagaaatacgttaagacaaagtgcccccac
gaagctgcgtatgatgccttcctctgtgggtcagttcttttgaaagtggcacacttgctt
ctacagaagatacatggtggatgttataaatacaaacgttctgtgacacatggatgggaa
gcttatttcttaaataagaaatgtgccagcctcaccctctttcttgtggtttggctgttt
atgggcccctgcatcgaccccgtgcccgagtcgtcctttcctcagtacctcgacgtgctg
gctccttacgtgaaccaagtgaacctcatccgcgcgggggtcccaaagatcaatttttct
ggtccagattatcccagtatccgacctcccatcctcatcctcagcatcaaaaggtggccc
ggggtcagcgagcagcaagtctaccataagtttcagaatctctgcaagtttgatgtcagg
cgactcacaagaagccagttcttactcctgaccaataagtttaaggacgcgcggaacgtc
ctgaaggagtaccggggccacccgaccctgtgcatctccctgtaccgctactggaggcac
tccccagacgtcaactgcgtgctccaagtctgtggcatagtgactgcctgggcccttctc
gcgttcatcttcggaagatctggtccctga
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