Macaca mulatta (rhesus monkey): 708287
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Entry
708287 CDS
T01028
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mcc
Macaca mulatta (rhesus monkey)
Pathway
mcc04151
PI3K-Akt signaling pathway
mcc04382
Cornified envelope formation
mcc04510
Focal adhesion
mcc04512
ECM-receptor interaction
mcc04518
Integrin signaling
mcc04820
Cytoskeleton in muscle cells
mcc04926
Relaxin signaling pathway
mcc04933
AGE-RAGE signaling pathway in diabetic complications
mcc04974
Protein digestion and absorption
mcc05146
Amoebiasis
mcc05165
Human papillomavirus infection
mcc05200
Pathways in cancer
mcc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
708287 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
708287 (COL4A4)
04518 Integrin signaling
708287 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
708287 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
708287 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
708287 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
708287 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
708287 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
708287 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
708287 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
708287 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
708287 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
708287 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcc04147
]
708287 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
mcc00536
]
708287 (COL4A4)
Exosome [BR:
mcc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
708287 (COL4A4)
Glycosaminoglycan binding proteins [BR:
mcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
708287 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
708287
NCBI-ProteinID:
XP_001110249
Ensembl:
ENSMMUG00000013233
UniProt:
F6XEQ9
LinkDB
All DBs
Position
12:complement(114457002..114612826)
Genome browser
AA seq
1692 aa
AA seq
DB search
MSSLHVVLMRCSFRLTKSLATGPWSLILILFSVQYVHGSGKKYVGPCGGRDCSVCHCVPE
KGSRGPPGPPGPQGPFGPLGAPGPTGLSGEKGMRGDRGPPGTAGDKGDKGPTGVPGFPGL
DGIPGHPGPPGPRGKPGKCGYNGSRGDPGFPGGRGALGPGGPPGHPGEKGEKGNSVFILG
AIKGIQGDRGDPGLPGLPGSWGAGGPAGPTGYPGEPGLVGPPGQPGRPGLKGNPGVGVKG
QMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMIGLPGPPGHKGESGIGAKGE
KGIPGFPGPWGDPGSYGSPGFPGLKGELGLVGDPGPFGFLGPKGDPGDRGHPGPPGVLVT
PPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQGFPGLPGLPG
EAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVTYCSVGNPGPQGIKGKVGPPGGR
GSKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGL
PGKPGASGPPGNKGAKGDVVISRVKGHKGERGPDGPPGFPGQPGSHGLDGHAGEKGDPGL
PGDHEDAIAGGKGFPGPLGPPGKAGPVGPPGLGFPGPPGERGHPGVPGRPGVRGPDGLKG
QKGDTVSCNVTYPGRQGPPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTSEIPGP
PGFRGDIGDPGFGGEKGSSPVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPG
IKGPRGDPGYPGAEGPAGIPGFPGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPG
LPGDPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPG
PPGPKGPRGLPGFPGFPGERGKPGAEGCPGTKGEPGEKGMSGFPGDQGVRGAKGTIGPPG
DEGEMAIISKKGKPGEPGPPGDDGFPGERGDKGTPGMQGRRGEPGRYGPPGFYRGEPGEK
GQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGDPAPA
SHFGPPGPKGEPGSSGCPGHFGASGEQGLPGVQGPRGSPGWPGPPGSSGPPGCPGDRGMP
GLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVG
PPGPVGMPGLKGERGDPGSPGISPPGPCGEKGLPGPPGRSGPPGPAGATGRVPKDIPDPG
PSGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGLPGLPGPPGPPGYKGFPGCD
GKDGQKGPMGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPPADADDCPRI
PGLPGVPGLRGPEGAMGLPGMRGPPGPGCKGEPGLDGRRGMDGIPGSPGPPGRKGDTGED
GYPGGPGPPGPTGDPGPKGFGAGYLSGFLLVLHSQTDQEPTCPLGMPRLWTGYSLLYLEG
QEKAHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMMPLSEEA
IRPYVSRCAVCEAPAQAVAVHSQDQSIPPCPQTWRSLWIGYSFLMHTGAGDQGGGQALMS
PGSCLEDFRAAPFLECQGRQGTCHFFANEYSFWLTTVKADLQFSSAPAPDTLKESQAQRQ
KISRCQVCVKYS
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctctgcacgtagtactaatgaggtgctccttcagattgaccaagtcattggcc
acaggtccctggtcacttatactcattctcttttctgtacaatacgtacatgggagtgga
aagaaatacgttggtccttgtggaggaagagattgctctgtttgccactgtgttcctgaa
aaggggtctcggggtccaccaggaccaccggggccacagggtccatttgggcccctggga
gccccaggacccactgggctttcaggagagaaaggaatgagaggggaccgcggccctcct
ggaacagcaggggacaaaggagataagggcccaactggtgttcctggatttccaggttta
gatggcatacctgggcacccagggcctcctggacccagaggcaaacctggtaagtgtggc
tacaatggctcaagaggtgacccagggtttccaggaggaagaggagctcttggtccagga
ggccccccaggccatcctggggaaaagggagaaaaaggaaattcagtgttcattttaggt
gccattaaaggtattcagggagacagaggcgacccaggactgcccggcttaccaggatct
tggggtgcaggaggaccggcgggccccacagggtatcctggagagccagggttagtggga
cctccgggccaaccagggcgtccaggtttgaagggaaatcccggtgtgggagtaaagggg
caaatgggagacccgggtgaggttggtcagcaaggttctcctggacccaccctgttggta
gagccacctgacttttgtctctataaaggagaaaagggtataaaaggaattcctggaatg
attggactgccaggaccaccaggacacaagggagaatctggtattggggcaaaaggagaa
aaaggcattcctggatttccagggccttggggggatcctggttcctacggatctccaggt
ttcccaggattaaagggagaactaggactggttggagatcctgggccatttggatttctt
ggcccaaagggggatcctggagaccgagggcacccaggaccaccaggtgttttggtgact
ccacctcttccactcaaaggcccaccaggggacccaggattccctggccgctatggagaa
acaggggatgttggaccacctggtcccccaggtctcttgggcagaccaggggaagcctgt
gcaggcatgataggaccccctgggccacaaggatttcctggtcttcctgggcttccagga
gaagctggtattcctgggagacctgattctgctccaggaaaaccagggaagccaggatca
cctggcttgcctggagcaccaggcctgcagggcctcccaggatcaagtgtgacatactgt
agtgttgggaaccctggaccacaaggaataaaaggcaaagtgggtcccccaggaggaaga
ggctcaaaaggagaaaaaggaaatgaaggactctgtgcctgtgagcctggtcccatgggc
ccccctggacctccaggacttcccgggaggcaggggagtaagggagacttggggctccct
ggctggcttggaacaaaaggtgacccaggacctcctggtgctgaaggacctccagggcta
ccaggaaagcctggtgcctctggaccacccggcaacaaaggggcgaagggtgacgtggtc
atatcaagagttaaaggacacaaaggagaaagaggtcctgatgggcccccaggatttcca
gggcaaccaggatcgcatggtctggatggacatgctggagaaaaaggggatccaggactc
ccaggggatcatgaagacgcgattgcaggtggtaaaggatttcctggacctctgggtccc
ccaggcaaagcaggacctgtggggcccccgggactgggatttcctggtccaccaggagag
cgaggccacccaggagttccaggccgcccaggtgtgaggggccctgatggcttgaagggt
cagaaaggtgacacagtttcttgcaatgtgacctatcctgggaggcaaggccctccaggt
tttgatggacctccaggtccaaagggatttccaggtccccaaggtgcccctgggctgagc
ggttcagatgggcataaaggcagacctggcacaccaggaacatcggaaataccaggtcca
cctggttttcgtggtgacataggagatccgggttttggaggtgaaaaggggtcctcccct
gttgggcccccaggccctcctgggtcaccaggagtgaatggtcagaaaggaatcccggga
gaccctgcatttggtcacctgggacccccgggaaagaggggtctttcaggagtgccaggg
ataaaaggacccagaggtgatccgggatatccaggtgctgaagggccagctggcattcct
ggattcccaggtctcaaaggtcccaaaggcagagagggacatgctgggtttccaggtgtc
ccaggtccacctggccattcctgtgaaagaggtgctccaggaataccagggcaaccggga
ctccctggggatccaggtagcccaggtgctccaggtgggaaaggacagccgggagatgtg
gggcctcctgggccagctggaatgaaaggtctccctggactcccaggacggcctggggca
cacggtcccccgggcctcccaggaatcccaggtccctttggggatgatgggctacctggt
cctccaggtccaaaaggaccccgggggctgcctggtttcccaggttttcccggagaacga
ggaaagcctggtgcagagggatgtcctggcacaaagggagaacccggagagaagggcatg
tctggctttcccggagaccagggagtgagaggggccaaaggaaccataggacctcctgga
gatgaaggagaaatggctatcatttccaaaaagggaaaacctggggaacctggacctcct
ggagatgatggattcccaggagaaagaggtgataaaggaacacccgggatgcaagggaga
agaggagagccgggaagatatggaccacctggattttacagaggggaacctggtgagaaa
ggtcagccagggcctcctggacccccaggccctccaggctcaactggtctaagagggttc
attggttttccaggacttccaggtgaccagggtgagccaggttctccaggtccccctgga
ttttcaggaatcgatggagcaagaggacctaaaggaaacaaaggtgaccctgcccctgcc
agtcactttggtccacctggtccaaagggtgagccaggtagctctggatgtccagggcat
tttggagcatccggagagcagggcttgcctggcgttcaagggcccagaggatcacctgga
tggccaggaccacctggctcctctggaccaccagggtgcccaggtgatcgggggatgcct
gggctgaggggacagccaggagaaatgggagaccctgggccaagaggcctccagggggat
ccagggataccaggtcctccaggaataaaaggtccttccgggtcacctggcctgaatggc
ttgcatggattgaagggtcagaaaggaaccaaaggtgcttcaggtttgcatgatgtgggg
ccacctggtcctgtgggaatgcctgggctaaaaggggagagaggagatcctgggagccca
ggaatctctcctccaggtccttgtggagaaaaaggtctcccaggtcccccagggagatca
ggaccacctggtcctgcaggtgccacaggaagagtgcctaaggacattcctgacccgggt
ccatctggagatcagggacctcctggtcccgatggcccaagaggagcacctgggcctcca
ggcctccctgggagtgttgacctcctgagaggggagccaggtgactgtggtctaccaggg
ctaccaggtctccccggcccaccaggccctccaggatacaaaggctttccaggatgtgat
ggaaaagatggccagaaaggaccaatgggattcccaggaccgcagggaccacatggattt
cctgggccacctggagagaagggtttacctggacctccagggagaaaaggacccactggt
cttccaggtcccagaggtgaaccggggccacctgcagatgcggatgactgtccccgaatc
ccagggcttcctggggtgccaggcctgagaggaccagaaggagccatgggactccctgga
atgagaggccccccaggaccagggtgcaaaggagagcctgggctggatggcaggaggggt
atggatggcattcctgggtctcctgggcctcccggacgtaaaggtgacacaggagaagac
ggctaccccggaggaccagggcctcctggtcccactggggatcctgggcccaaagggttt
ggcgctggatacctcagtggcttcctcctggttctccacagtcagacggaccaggagccc
acctgccccctgggcatgcccaggctctggactgggtatagtctgttatacctggaaggg
caagagaaagctcacaatcaagaccttggtctggcagggtcttgccttcccgtgtttagc
acgctgccctttgcctactgcaacatccaccaggtgtgccactatgcccagagaaacgac
agatcctactggctggccagcgctgcacccctccccatgatgccactctctgaagaggcg
atccgcccctacgtcagccgctgtgcggtatgcgaggccccggcccaggcggtggcggtg
cacagccaggaccagtccatccccccatgtccgcagacctggaggagcctctggattggg
tattcattcctgatgcacacaggagctggggaccaaggaggagggcaggccctcatgtca
ccgggtagctgcctggaagatttcagagcagcaccattccttgaatgccaaggccggcag
ggaacttgccacttttttgcaaatgagtatagcttctggctgacaacagtgaaagcagac
ttgcagttttcctctgctccagcaccagacaccttaaaagaaagccaggcccaacgccag
aaaatcagccggtgccaggtctgcgtgaagtatagctag
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integrated database retrieval system
