Macaca mulatta (rhesus monkey): 709173
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Entry
709173 CDS
T01028
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
mcc
Macaca mulatta (rhesus monkey)
Pathway
mcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
709173 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcc03041
]
709173 (DHX38)
Enzymes [BR:
mcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
709173 (DHX38)
Spliceosome [BR:
mcc03041
]
Complex C
Other components
Step II factors
709173 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
709173
NCBI-ProteinID:
NP_001244810
Ensembl:
ENSMMUG00000000677
UniProt:
I0FWS8
A0A8J8YQZ8
LinkDB
All DBs
Position
20:complement(59399732..59418987)
Genome browser
AA seq
1227 aa
AA seq
DB search
MGDTSEDASIHRLEGTDLDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSKISSYKDWEESKDDQKDAEEEGGDQAGRNIRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDWKKEKSRDRDYDRKRDRDDRDRSRHSS
RSERDGGSERSSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGSSRRSQWESPSPTPSYR
DSERSHRLSTRDRDRSVRGKYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREEG
EEGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQ
KRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDNAAKVHLMVHNLVPPFLDGR
IVFTKQPEPVVPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMG
VKKEEEPDKAVTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQE
LLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEE
MGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLN
TDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQ
EDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYS
QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL
QIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS
LGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI
VSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKN
NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQ
AAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEW
LAELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVR
STKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaccagtgaggatgcctccatccatcgattggaaggcactgatctggactct
caggttggcggtcttatttgcaagaccaaaagtgcggccagcgagcagcatgtcttcaag
gcacctgctccccgcccttcattactgggactggacttgctggcttccctgaaacggagg
gagcgagaggagaaggacgatggggaggacaagaagaagtccaaaatctcttcctacaag
gactgggaagagagcaaggatgaccagaaggatgccgaggaagagggcggtgaccaggct
ggccgaaatatccggaaagacagacattatcgatctgcccgggtagaaactccatcccat
ccaggtggtgtgagcgaagagttttgggaacgcagtcggcagagagagcgggagcggcgc
gaacatggtgtctatgcctcatccaaagaagaaaaggattggaagaaggagaaatcgcgg
gatcgagactatgaccgcaagagggacagagatgaccgggatagaagtaggcacagcagc
agatcggagcgagatggagggtcagagcgtagcagcagaagaaatgagcctgagagccca
cgacatcgacctaaagatgcagccaccccttcgaggtctacctgggaggaagaggacagt
ggctatggctcctcaaggcgctcccagtgggaatcgccctccccgacgccttcatatcgg
gattctgagcggagccatcggctgtccactcgagatcgagacaggtctgtgaggggcaag
tactcggatgacacgcctctgccaactccctcctacaaatacaatgagtgggccgatgac
agaagacacttggggtccaccccacgtctgtccagaggtcgaggaagacgcgaggaaggc
gaagaaggaatttcatttgacacggaggaggagcggcagcagtgggaggatgaccagagg
caagccgatcgggattggtacatgatggacgagggctatgatgagttccacaacccactg
gcctactcctctgaggactatgtgaggaggcgggagcagcacctgcataaacagaagcag
aagcgcatttcagctcagcggagacagatcaatgaggataacgagcgctgggagacaaac
cgcatgctcaccagtggggtggtccatcggctggaggtggacgaggattttgaagaggac
aatgcagccaaggtgcatctgatggtgcacaatctggtgcctccctttctggatgggcgc
attgtcttcaccaagcagccggagccggtggttccagtgaaggacgccacttctgacctg
gccatcattgctcggaaaggcagccaaacagtgcggaagcacagggagcagaaggagcgc
aagaaggctcagcacaaacactgggaactggctgggaccaaactgggagatataatgggc
gtcaagaaggaggaagaaccagataaagctgtgacggaggacgggaaggtggactacagg
acagagcagaagtttgcagatcacatgaagaaaaagagcgaagccagcagtgaatttgca
aagaagaagtccatcctggagcagaggcagtacctgcccatctttgcagtgcagcaggag
ctgctcactattatcagagacaacagcatcgtgattgtggttggggagacagggagtggt
aagaccactcagctgacacagtacctgcatgaagatggttacacggactacgggatgatt
gggtgtacccagccccggcgtgtagctgccatgtcagtggccaagagagtcagtgaagag
atggggggaaaccttggtgaggaggtgggctatgccatccgctttgaagactgcacttca
gagaacaccttgatcaaatacatgactgacgggatcctgctccgagagtccctccgggaa
gccgacctggatcactacagtgccatcatcatggacgaggcccacgagcgctccctcaac
actgacgtgctcttcgggctgctccgggaggtggtggctcggcgctcagacctgaagctc
atcgtcacatcagccacgatggatgcagagaagtttgctgccttttttgggaatgtcccc
atcttccacatccctggccgtaccttccctgttgacattctcttcagcaagaccccacag
gaggattacgtggaggctgcagtgaagcagtccttgcaggtacacctgtcgggggcccct
ggggacatccttatcttcatgcctggccaggaggacattgaggtgacctcagaccaaatt
gtggagcatctggaggaactggagaatgcacctgccctggccgtgctgcccatctactct
cagctgccttctgacctccaggccaaaatcttccagaaggctccagatggcgttcggaag
tgcattgttgccaccaacattgccgagacgtctctgactgttgacggcatcatgtttgtt
atcgattctggttattgcaaattaaaggtcttcaaccccaggattggcatggatgctctg
cagatctatcccattagccaggccaatgccaatcagcggtcagggcgagccggcaggacg
ggcccaggtcagtgtttcaggctctacacccagagcgcctacaagaatgagctcctgacc
accacagtgcccgagatccagaggaccaacctggccaacgtggtgctgctgctcaagtcc
cttggggtgcaggacctgctgcagttccacttcatggacccgcccccggaggacaacatg
ctcaactccatgtatcagctctggatcctcggggccctggacaacacaggtggtctgacc
tctaccgggcggctgatggtggagttcccgctggaccctgccctgtccaagatgctcatc
gtgtcctgtgacatgggctgcagttccgagatcttgctcatcgtgtccatgctctccgtc
ccggccatcttctacaggcccaagggtcgagaggaggagagtgatcaaatccgggagaag
tttgctgtccctgagagcgatcatttgacctacctgaatgtctacctgcagtggaagaac
aataattactccaccatctggtgtaacgatcatttcatccatgctaaggccatgcggaag
gtccgggaggtgcgagctcaactcaaagacatcatggtgcagcagcggatgagcctggcc
tcgtgtggcactgactgggacatcgtcaggaagtgcatctgtgctgcctatttccaccaa
gcagccaagctcaagggaatcggggagtacgtgaacatccgcacggggatgccctgccac
ttgcaccccaccagctccctttttggaatgggctacaccccggattacatagtgtatcac
gagttggtcatgaccaccaaggagtacatgcagtgcgtgaccgctgtggacggggagtgg
ctggcggagctgggccccatgttttacagcgtgaaacaggcgggcaagtcacggcaggag
aaccgtcgtcgggccaaagaggaagcctctgccatggaggaggagatggcgctggccgag
gaacagctgcgagcacggcggcaggagcaggagaagcgcagccccctgggcagtgtcagg
tctacgaagatctacactccaggccggaaagagcaaggggagcctatgacccctcgccgc
acgccagcccgctttggtctgtga
DBGET
integrated database retrieval system
