Macaca mulatta (rhesus monkey): 712753
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Entry
712753 CDS
T01028
Symbol
COL11A1
Name
(RefSeq) collagen alpha-1(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
mcc
Macaca mulatta (rhesus monkey)
Pathway
mcc04820
Cytoskeleton in muscle cells
mcc04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
712753 (COL11A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
712753 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mcc00536
]
712753 (COL11A1)
Glycosaminoglycan binding proteins [BR:
mcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
712753 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
712753
NCBI-ProteinID:
XP_015001490
Ensembl:
ENSMMUG00000004103
LinkDB
All DBs
Position
1:121115851..121335153
Genome browser
AA seq
1857 aa
AA seq
DB search
MEPWSSRWKTKRWLWDFTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGF
CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGPFPEDFSILFTVKPKKGIQSFLLSIYN
EHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYS
PDCDSSAPKAAQAQEPQIDEYEPEDIIEYDYEYGEAEYKEAESVTEGPTVTEETIAQTEK
KKSNFKKKTRTVATNSKEKSKKFTPPKSEKFSSKKKKSYQASAKAKLGVKANIVDDFQEY
NYGTMESYQTEAPRRVSGTNEPNPVEEIFTEEYLTGEDYDSQRKNSEDTLYENKEIDDRD
SDLLVDGDLGEYDFYEYKEYEDKPTRPPNEEFGPGVPAETDITETSINGHGAYGEKGQKG
EPAVVEPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPP
GTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSA
GAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGSKGDRGFDGLPGLP
GDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMA
GVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGAD
GPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFK
GDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQ
GPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGD
GPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVV
GPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFP
GERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEK
GAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPP
GPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEK
GENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEA
GVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQD
GVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPP
GKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSK
GEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQ
GPKGNKGSTGPAGQKGDSGLPGPPGPPGPPGEVIQPLPILSSKKTRRHTEGMQADADDNI
LDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQG
CSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKLLSYLDVEGN
SINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPF
IKALYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCFLG
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggagccgtggtcctctaggtggaaaacgaaacggtggctctgggatttcactgtaaca
accctcgcgttgactttcctcttccaagctagagaggtcagaggagctgctccagttgat
gtactaaaagcactagattttcacaattctccagagggaatatcaaaaacaacggggttt
tgcacaaacagaaagaattctaaaggctcagatactgcttacagagtttcaaagcaagca
caactcagtgccccaacaaaacagttatttccaggtggaccttttccagaagacttttca
atattatttacagtgaaaccaaaaaaaggaattcagtctttccttttatctatatataat
gagcatggtattcagcaaattggtgttgaggttggaagatcacctgtttttctgtttgaa
gaccacactggaaaacctgccccagaagactatcccctcttcagaactgttaacatcgct
gatgggaagtggcatcgggtagcaatcagcgtggagaagaaaactgtgacaatgattgtt
gattgtaagaagaaaaccacgaaaccacttgatagaagtgagagagcaattgttgatacc
aatggaatcacggtttttggaacaaggattttggatgaagaagtttttgagggggacatc
cagcagtttttgatcacaggtgaccccaaggcagcatatgactactgtgagcattatagt
ccagactgtgactcttcagcacccaaggctgctcaggctcaggaacctcagatagatgag
tatgaaccagaggatataatcgaatatgactatgagtatggggaagcagagtataaagag
gctgaaagtgtaacagagggacccactgtaactgaggagacaatagcacagacggagaaa
aagaaatccaatttcaaaaagaagacgaggacagtggctactaactcaaaggaaaagtcc
aaaaagtttacaccccccaaatctgaaaaattttcatccaagaagaagaaaagttatcaa
gcatcagcaaaagccaaactaggggtaaaggcaaatatcgttgatgattttcaagaatac
aactatggaacaatggaaagttaccagacagaagctcctaggcgtgtttctgggacaaat
gagccaaatccagttgaagaaatatttactgaagaatatctaacgggagaggattatgat
tcccagaggaaaaattctgaggatacactatatgaaaacaaagaaatagacgacagggac
tctgatcttctggtagatggagatttaggcgaatatgatttttatgaatataaagaatat
gaagataaaccaacaaggccccctaatgaagaatttggtccaggtgtaccagcagaaact
gatattacagaaacaagcataaatggccatggtgcatatggagagaaaggacagaaagga
gaaccagcagtggttgagcctggcatgcttgtcgaaggaccaccaggaccagcaggacct
gcaggtattatgggtcctccaggtctacaaggccccactggaccccctggtgacccgggc
gataggggtcccccaggacgtcctggcttaccaggggctgatggtctacctggtcctcct
ggtactatgttgatgttaccgttccgttatggtggtgatggttccaaaggaccaaccatc
tctgctcaggaagctcaggctcaagctattcttcagcaggctcggattgctctgagaggc
ccacctggcccaatgggtctaactggaagaccaggtcctgtgggggggcctggttcagct
ggggccaaaggtgagagtggcgatccaggtcctcagggccctcgaggcgtccagggtccc
cctggtccaacgggaaaacctggaaaaaggggtcgtccaggtgcagatggaggaagagga
atgccaggagaacctgggtcaaagggagatcgagggtttgatggacttccaggtctgcca
ggtgacaaaggtcacaggggtgaacgaggtccacaaggtcctccaggtcctcctggtgat
gatggaatgaggggagaagatggagaaattggaccaagaggtcttccaggtgaagctggc
ccacgaggtttgctgggtccaaggggaactccaggagctccagggcagcctggtatggca
ggtgtagatggccccccaggaccaaaagggaacatgggtccccaaggggagcctgggcct
ccaggtcaacaagggaatccaggacctcagggtcttcctggtccacaaggtccaattggt
cctcctggtgaaaaaggaccacaaggaaaaccaggacttgctggacttcctggtgctgat
gggcctcctggtcatcctgggaaagaaggccagtctggagaaaagggtgctctgggtcct
cctggtccacaaggtcctattggctaccctggcccccgaggagtcaagggagcagatggt
gtcagaggtctcaagggatctaaaggtgaaaagggtgaagatggttttccaggattcaaa
ggtgacatgggtctaaaaggtgacagaggagaagttggtcagattggcccaagaggggaa
gatggccctgaaggcccgaaaggtcgagcaggcccaactggagacccaggtccttcaggt
caagcaggagaaaagggaaaacttggagttccaggattaccaggatatccgggaagacaa
ggtccaaagggttccactggattccctgggtttccaggtgccaatggagagaaaggtgca
cggggagtagctggcaaaccaggccctcggggtcagcgcggtccaacgggtcctcgaggt
tcgagaggtgcaagaggtcccactgggaaacccgggccaaagggcacttcaggtggtgat
ggccctcctggccctccaggtgaaagaggtcctcaaggacctcagggtccagttggattc
cctggaccaaaaggccctcctggaccacctgggaaggatgggctgccaggacaccctggg
caacgtggggagactggatttcaaggcaagaccggccctcctgggccagggggagtggtt
ggaccacagggaccaaccggcgagactggtccaataggggaacgtgggcatcctggccct
cctggccctcctggtgagcaaggtcttcctggtgctgctggaaaagaaggtgcaaagggt
gatccaggtcctcaaggtatctcagggaaagatggaccagcaggattacgtggtttccca
ggggaaagaggtcttcctggagctcagggtgcacctggactgaaaggaggggaaggtccc
cagggcccaccaggtccagttggctcaccaggagaacgtgggtcagcaggtacagctggc
ccaattggtttaccagggcgcccgggacctcagggtcctcctggtccagctggagagaaa
ggtgctcctggagaaaaaggtccccaagggcctgcagggagagatggagttcaaggtcct
gttggtctcccagggccagctggtcctgccggctctcctggggaagacggagacaagggt
gaaattggtgaaccgggacaaaaaggcagcaagggtgacaaaggagaaaatggtcctcct
ggtcccccaggtcttcaaggaccagttggtgcccctggaattgctggaggtgatggtgaa
ccgggtcctagaggacagcaggggatgtttgggcaaaaaggtgatgagggtgccagaggc
ttccctggacctcctggtccaataggtcttcagggtctgccaggcccacctggtgaaaaa
ggtgaaaatggggatgttggtcccatgggtccacctggtcctccaggcccaagaggccct
caaggtcccaatggagctgacggaccacaaggacccccaggatctgttggttcagttggt
ggtgttggagaaaagggtgaacctggagaagcagggaacccaggacctcctggggaagca
ggtgtaggcggtcccaaaggagaaagaggagagaaaggagaagctggtccacctggagct
gctggacctcctggtgccaaggggccaccaggtgatgatggccctaagggtaacccgggc
cctgttggttttcctggagatcctggtcctcctggggaacctggccctgcaggtcaagat
ggtgttggtggtgacaagggtgaagatggagatcctggccaaccgggtcctcctggtcca
tctggtgaggctggcccaccaggtcctcctggaaaaagaggtcctcctggagctgcaggt
gcagagggaagacaaggtgaaaaaggcgcaaagggagaagcaggtgccgaaggtcctcct
ggaaaaaccggcccagttggtcctcagggacctgcaggaaagcctggtccagaaggtctt
cggggcatccctggccctgtgggagaacaaggtctccctggagctgcaggccaagatgga
ccacctggtcctatgggacctcctggcttacctggtctcaaaggtgaccctggctccaag
ggtgaaaagggacatcctggtttaattggcctgattggtcctccaggagaacaaggggaa
aaaggtgaccgagggctccctggaactcaaggatctccaggagcaaaaggggatggggga
attcctggtcctgctggtccattaggtccacctggtcctccaggcttgccaggtcctcaa
ggcccaaagggtaacaaaggttctactggacccgctggccagaaaggtgacagtggtctt
ccagggcctcctgggcctccgggtccacctggagaagtcattcagcctttaccaatcttg
tcctccaaaaaaacgagaagacatactgaaggcatgcaagcagatgcagatgataatatt
cttgattactcagatggaatggaagaaatatttggttccctcaattccctgaaacaagac
atcgagcatatgaaatttcctatgggtactcagaccaatccagcccgaacttgtaaagac
ctgcaactcagccatcctgacttcccagatggtgaatattggattgatcctaaccaaggt
tgctcaggagattccttcaaagtttactgtaatttcacatctggtggtgagacttgcatt
tatccagacaaaaaatctgagggagtaagaatttcatcatggccaaaagagaaaccagga
agttggtttagtgagtttaagaggggaaaactgctttcatatttagatgttgaaggaaat
tccatcaatatggtgcaaatgacattcctgaaacttctgactgcctctgctcggcaaaat
ttcacctaccactgtcatcagtcagcagcctggtatgatgtgtcatcaggaagttatgac
aaagcccttcggttcctgggatcgaatgatgaggagatgtcctatgacaataaccctttc
atcaaagcactgtatgatggctgtgcgtccagaaaaggctatgaaaagactgtcattgaa
atcaatacaccaaaaattgatcaagtacctattgttgatgtcatgatcaatgacttcggt
gatcagaatcagaagttcggatttgaagttggtcccgtttgttttcttggctaa
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integrated database retrieval system
