KEGG   Macaca mulatta (rhesus monkey): 714852
Entry
714852            CDS       T01028                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
mcc  Macaca mulatta (rhesus monkey)
Pathway
mcc03013  Nucleocytoplasmic transport
mcc03015  mRNA surveillance pathway
mcc03040  Spliceosome
mcc05014  Amyotrophic lateral sclerosis
mcc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mcc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    714852 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    714852 (ALYREF)
   03015 mRNA surveillance pathway
    714852 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    714852 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    714852 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcc03019]
    714852 (ALYREF)
   03041 Spliceosome [BR:mcc03041]
    714852 (ALYREF)
Messenger RNA biogenesis [BR:mcc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     714852 (ALYREF)
    TREX complex
     714852 (ALYREF)
Spliceosome [BR:mcc03041]
 Complex C
  Other components
   EJC/TREX
    714852 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    714852 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT RRM_occluded
Other DBs
NCBI-GeneID: 714852
NCBI-ProteinID: NP_001247942
Ensembl: ENSMMUG00000012884
UniProt: F6S9B3
LinkDB
Position
16:complement(78187103..78190724)
AA seq 264 aa
MPDSAPAMADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVSRGGG
PIRNRPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG
RPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRGRGAGRN
SKQQLSAEELDAQLDAYNARMDTS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgcccgattccgcgcccgccatggccgacaaaatggacatgtctctggacgacatcatt
aaactgaaccggagccaacgaggcggccgcggcgggggccggggccgcggccgggccggc
tcccagggcggtcgcggcggtggggcgcaggccgccgcgcgagtgagtcgaggcggcggg
cccatccggaaccggccggccatcgcccgcggcgcggccggcggaggcggcaggaaccga
ccggcgccctacagcaggccaaaacaacttcccgacaagtggcagcacgatcttttcgac
agtggcttcgggggtggtgccggcgtggagacgggtgggaaactgctggtgtccaatctg
gattttggagtttcagacgccgatattcaggaactctttgctgaatttggaacgctgaag
aaggcggctgtgcactatgatcgctctggccgcagcttaggaacagcagacgtgcacttt
gagcggaaggcagatgccctgaaggccatgaagcagtacaacggcgtccctctggatggc
cgccccatgaacattcagcttgtcacatcacagattgatacacagcggagacctgcacag
agcgtaaacagaggtggcatgactagaaaccgtggcgctggaggttttggtggcggtgga
ggcactcggaggggcacccgtggaggcgcccgtggaagaggcagaggtgccggcagaaat
tcaaagcagcagctttcggcagaggagctggatgctcagctggacgcctataatgcgaga
atggacaccagttaa

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