Macaca mulatta (rhesus monkey): 716986
Help
Entry
716986 CDS
T01028
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
mcc
Macaca mulatta (rhesus monkey)
Pathway
mcc04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
716986 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mcc00536
]
716986 (COL13A1)
Glycosaminoglycan binding proteins [BR:
mcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
716986 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
716986
NCBI-ProteinID:
XP_015002968
LinkDB
All DBs
Position
9:complement(67825528..67984702)
Genome browser
AA seq
693 aa
AA seq
DB search
MVAESTHKAAATGACGPRELGAPGTVALAAARAERGARLPSPGSCGLLALALCSLALSLL
AHFRTAELQARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP
PGPPGPTGRPGLPGDKGAIGMPGRVGVKGQPGEKGSPGDAGLSIIGPRGPPGQPGTRGFP
GFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAP
PPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPVGPPGLPGPPGPKGDPGI
QGYHGRKGERGMPGMPGKHGAKGTPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK
GEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGRQGDKGEPGAAGEQGPAG
PKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLP
GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGMKGENGHPGSPGEKGEKGETGQAGSP
GEKGEAGEKGDPGAEGLQGVPGPKGEAGLDGAKGEKGIQGEKGDRGPLGLPGASGLDGRP
GPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSR
GPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggagagcacccacaaagcggcagccactggtgcctgcggccctagggagttg
ggcgcgcccgggacggtggctctggcggcggcgcgggcggagcgcggcgcacggctgccg
agtccagggtcgtgcgggctgctggcgctggccctctgctcgctggcactcagcctgctc
gcccactttcggacggcggagctgcaggcccgggtgctgcgcctggaagcggagcgcggg
gagcagcaaatggagacggctattttgggacgagtcaaccaactgctggacgagaaatgg
aagctccactcaaggaggcgccgggaggccccaaagacatctccaggatgtaactgccca
ccaggacctcctggtcccactggaagacctggactcccaggggacaaaggtgccattggg
atgcctggacgtgtgggagtaaagggccaaccaggcgagaaggggtcccccggagatgct
gggctgtccatcatcggcccccgcggcccccctggtcaaccaggcactcgaggttttcct
ggatttccgggtcccattgggctggatggcaaaccgggccacccaggaccaaagggcgac
atgggtctgacgggtcccccaggacagccgggacctcagggacaaaaaggagaaaagggt
cagtgtggagagtacccacaccggctgctgcctctcctcaattcagtgcgactggctcca
cccccggtcataaaaaggcggacattccagggtgaacagagccaagccagcatccaaggt
ccaccagggcccccaggcccccctggaccaagtggacctctggggcacccaggactgcca
gggcccgtggggccacccggcttacctgggcctcctggaccaaagggagacccagggatc
cagggctaccacggccggaagggagaacggggcatgccagggatgcccggcaagcatgga
gccaagggcactcctggaattgccgtggctgggatgaagggcgagccagggatcccagga
accaagggtgagaagggggctgaaggctcccctgggcttcctggcctcctggggcagaag
ggagagaaaggcgatgctggcaactccattggaggaggcagaggggaacctggccctcca
gggctccctggacccccagggccaaagggagaagcgggtgtcgatggccaggtcggcccc
ccagggcggcaaggagacaagggggagcctggagcagctggagaacagggaccagctggc
cccaagggctccaagggagaaccagggaaaggagagatggtggattacaatggaaacatc
aatgaggctctccaggagatccggacactggccttgatggggcctcctggtcttcctggg
caaattggcccacctggagctccagggattccaggccagaagggggagattggactgcca
ggccctccaggacacgatggggagaagggacctcgcggtaaaccaggagacatgggccct
cctggtccccaaggccccccaggaaaggatggacctccaggaatgaaaggagaaaacggg
cacccagggagcccaggagaaaagggagagaaaggagagacaggacaagcaggctcgccg
ggagagaaaggagaagccggggagaagggcgatccaggagcagaggggctccaaggtgtt
cctggaccaaagggggaagcaggactagatggagcaaaaggagagaaaggcatccaggga
gaaaaaggagaccgtggtcccctgggactacccggagcttcaggtttggacggcaggcct
gggccaccgggtactccaggaccaattggagttccaggcccagcaggaccaaagggcgag
aggggcagcaaaggagaccctgggatgacaggaccaacgggagcagctgggcttcctggt
ttacatggaccacccggggacaagggaaaccggggggagagggggaagaaaggctctaga
gggcctaaaggggataagggagaccaaggagcgcctggattagatgccccctgcccattg
ggcgaagatggcttgccagtccaaggctgctggaacaagtga
DBGET
integrated database retrieval system
