Macaca mulatta (rhesus monkey): 717103
Help
Entry
717103 CDS
T01028
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
mcc
Macaca mulatta (rhesus monkey)
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcc03037
]
717103 (CCDC88A)
Cilium and associated proteins [BR:
mcc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
717103 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Dermcidin
Motif
Other DBs
NCBI-GeneID:
717103
NCBI-ProteinID:
XP_014967866
Ensembl:
ENSMMUG00000003003
LinkDB
All DBs
Position
13:53224620..53355495
Genome browser
AA seq
2027 aa
AA seq
DB search
MENEIFTPLLEQFMTSPLVTWVKTFGPLTAGNGTNLDEYVALVDGVFLNQVMLQINPKLE
SQRVNKKVNNDASLRMHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MSQEDIEPLLKNMALHLKRLIDERDEHSETIIELSEERDGLHSLPHASSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS
DARSARMYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELR
TTVDSVEGNASKILKIEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS
SKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEA
LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM
AQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKALENSNKKIQ
QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKTLSKEIGVYKESCIRLKELEKENKELVKRATID
IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKLLESK
LESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSS
PPISGEDNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQ
AQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENE
SVIKEREDLKSLYDSLIKDHEKLELLHERQASEYESLISKHGTLKSAHKNLEVEHRDLED
RYNQLLKQKGQLEDLEKMLKVEQEKMLLENKNHETVAAEYKKLCGENDRLNHTYSQLLKE
TEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQDSQ
DSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMV
LAGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSAGFRSKQLVNNKDTT
SFEDISPQGVSDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNNQSRPQS
HSSGEFSLLHDHEAWSSSGSSPIQYLKRQTRSSPVLQHKISETLESRHHKIKTGSPGSEV
VTLQQFLEESNKLTSIQIKSSSQENLLDEVMKSLSVSSDFLGKDKPVSCGLARSVSGKTP
GDFYDRWTTKPEFLRPGPRKTEDTYFISSAGKPTPGTQGKIKLVKESSLSRQSKDSNPYA
TLPRASSVISTAEGTTRRTSIHDFLTKDSRLPISVDSSPAAADSNTTAASSEYHLHQWSS
DILDSPTHTIGSCAQNDLAIDMPESLYVQARNSRTERSHFLNQTFATIKMPSGAFGMLAK
DSIGPFTVAHSSQPFLSLNTELVSNISGLPPRPVTRITDQASAFLDKPAQKENEQFSDHQ
NPSNSNLQFSINSNNLVTPACLCPDDTEAALLVSEDNQTVWYEYGCI
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaaatttttactccccttctggagcagttcatgaccagccccttggtcact
tgggttaaaacgtttggacctctgactgcaggaaatgggaccaaccttgatgaatatgtg
gctttggtggatggggtgttcctgaaccaggtcatgctccaaattaatcctaaattggag
agtcagagagtaaataaaaaagtcaataatgatgcctcacttagaatgcacaatctatcc
attttggtgagacagataaaattttattaccaggagactttgcagcaattgatcatgatg
tcgttgccaaatgtcttaatcattggcaaaaatcccttttctgaacaaggcacagaagaa
gttaaaaaactgcttttacttttattgggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaattcaaggtttagattttgatacaaaagcagcagttgccgcacatatt
caagaggtaactcataatcaggaaaatgtgtttgacctgcaatggatggaagtgaccgat
atgtcgcaggaggacatagaaccactcttgaaaaatatggcattgcatctaaaaagactt
atagatgagagagatgaacattcagagactatcatagaactctctgaagagcgagatggt
cttcattctctaccccatgcctcttcatctgcacagtcaccctgtggttctccaggcatg
aagcgaacagaaagtcgacaacatctgtcggtggaactggcagatgctaaagccaagata
cgaaggcttaggcaggaattggaggaaaagactgaacagttgttggattgtaaacaagaa
cttgagcaaatggaaatagaactcaaaaggctgcaacaagagaacatgaatttgctttcg
gatgctcgctctgccagaatgtaccgagatgaattagatgcacttcgagagaaagcaatc
agagttgataagcttgaaagtgaagtcagcagatataaagagagactacatgatattgaa
ttttataaggcaagagttgaggagttaaaagaagacaatcaagttttattagaaacaaaa
accatgttggaagaccaactagaaggaactcgtgctcgttctgataaattacatgaatta
gaaaaagagaacttacaactaaaagctaaacttcatgatatggaaatggaacgagatatg
gatagaaaaaagattgaagaattaatggaagaaaatatgactttggaaatggcacagaaa
caaagtatggatgaatcattacatcttggctgggagctggaacagatatccagaactagt
gaactttccgaagcaccacagaaatccctgggccatgaggtgaatgagttgacatcaagt
agattattgaagttagagatggaaaatcaaagtttgacaaaaactgtagaagagcttcgg
actactgtggattctgtagagggcaatgcttccaaaatcctgaaaattgaaaaagaaaat
caaagactcagtaaaaaggttgaaattcttgaaaatgagattgttcaagaaaagcaaagt
cttcagaattgtcagaatttaagcaaggatctaatgaaggagaaagctcagcttgaaaaa
acaattgaaacactgagagaaaattcagagagacagattaagatattggaacaggaaaat
gaacatctgaatcaaacagtgtcttctttaaggcagcggtcccagataagtgcagaagca
agagtgaaagacattgaaaaagaaaacaaaattctccatgaatctatcaaagaaacaagt
agcaagctaagcaagattgaatttgaaaaaagacaaattaaaaaagaactggaacattat
aaagaaaaaggagaacgagcagaagaacttgaaaatgaattgcatcatcttgaaaaagaa
aatgaattgttacagaaaaaaataactaatttaaaaattacttgtgaaaaaattgaggcg
ttagaacaagaaaattcagagctagaaagagaaaatagaaaattaaaaaaaacattggat
agctttaaaaatctgacctttcagttagaatccctagagaaagagaattcccaacttgat
gaggaaaacttagagctgcgaaggaatgtagaatctttgaagtgtgcaagcatgaaaatg
gctcagctacagctagaaaacaaagaactggaaagtgaaaaagagcaacttaaaaaaggt
ttggagctcctgaaagcatctttcaagaaaacagaacgcttggaagttagctaccagggt
ttagatatagaaaatcaaagactgcaaaaagctttagagaacagcaataaaaaaatccag
caattagagagtgaactacaagacttagagatggaaaatcaaacattgcaaaaaaaccta
gaagaactaaaaatatctagcaaaagactagaacaactggaaaaagaaaataaatcatta
gagcaagagacttctcaactggaaaaggataagaaacaattggagaaggaaaataagaga
ctccgacagcaagcagaaattaaagataccacattagaagaaaataatgtgaagattgga
aatttggaaaaagaaaacaaaactctatccaaagaaattggtgtatataaagaatcttgt
atccgtctaaaagaactagaaaaagaaaataaggagcttgtgaaaagagcaactattgat
ataaaaacgttggttacactacgtgaggatttggtgagtgaaaaattgaagacccaacag
atgaacaatgatcttgaaaaattaactcatgagcttgagaagatagggttgaataaggag
agactcttacatgatgagcaaagtactgatgacagtaggtataaacttttggaatcaaaa
ttagaatccactcttaagaagtctcttgaaataaaagaagaaaaaattgctgctttagaa
gctcgattagaagaatccacgaattataaccagcaattgcgccaagaacttaaaacagtg
aaaaaaaattatgaagctctcaaacagagacaagatgaggaaaggatggtacagagctct
cctccaatatctggtgaagacaataaatgggagcgagaaagtcaagaaacaactagagaa
cttctgaaagttaaagacagattaattgaagtagaaagaaataatgctacactgcaagca
gagaagcaagcgttgaaaactcaactgaagcagcttgagacacaaaacaataatttgcag
gctcagattcttgcacttcagaggcagacagtatcattacaggaacagaataccactctt
caaacacagaatgccaagcttcaggttgaaaattctacccttaattcccaaagtacctca
cttatgaaccagaatgcacaactcctaatccagcagtcttccttagaaaatgaaaatgaa
tcggtaatcaaagagcgagaagacctaaaatctctctatgattctctgatcaaagatcat
gaaaagctggaacttcttcatgaacgtcaggcttcagagtatgaatctcttatctctaaa
catggaactctgaagtctgcccacaaaaatcttgaggtggaacatagagaccttgaagac
cgttacaatcagttattaaaacagaaaggacaattggaagatttggaaaaaatgctcaaa
gtagaacaggaaaaaatgctgcttgaaaataaaaaccatgaaacggtagctgcagaatac
aagaaactttgtggtgaaaatgataggttgaatcatacctatagtcaacttttaaaagag
acagaagttttacaaactgaccataaaaatttgaaaagtcttctgaataattccaaactg
gaacaaacaagattagaagctgaattttcaaagctaaaggaacaataccaacaactggat
attacatcaaccaagctgaataaccagtgtgagttgctaagccaacttaaaggaaattta
gaagaagaaaatcgacatctactagatcaaattcagacattaatgctacagaacagaaca
cttttggagcagaatatggaaagcaaggatctttttcatgttgaacaaagacagtacatt
gataagttaaatgaattaagacgtcagaaggagaaattagaagagaaaattatggatcaa
tacaaattttatgacccatctcctcctagaaggagaggcaactggattactctaaaaatg
agaaaattgataaagtctaagaaagatattaatcgggaacgccagaaatctctaacatta
acacctacccgctcagactccagtgaaggatttcttcagctccctcatcaagacagtcaa
gatagttcttcagtaggttcaaactctttagaagatggccagaccttggggaccaagaaa
agcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagac
aaaatgaaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtc
ctagcaggacagtggacaggtagtactgagaatttggaggttcctgatgatatttcaacg
ggtaaaaggagaaaagaattgggagctatggccttctctactacagccatcaacttttca
actgtcaactcttctgcaggcttcagatccaagcagttggttaataataaagatactacg
tcctttgaagacataagtccacaaggtgttagtgatgattctagtacgggatcaagagtt
catgcttcaagaccagccagccttgatagtggcagaacatccactagcaatagcaataat
aatgcttcactacatgaagtcaaagcaggtgcagttaataaccaaagcaggccacaaagc
cacagcagtggagaatttagcctgcttcatgaccatgaggcttggtccagcagtggtagc
agtccaatccagtacttgaaaagacagaccagatcaagtccagtgctccaacacaaaata
tctgaaacactggagagtcgacatcacaaaataaaaactggttcccctggaagtgaagtt
gttactctacaacagtttttggaagaaagcaataagcttacctcaatacagataaagtcc
tcaagtcaagaaaatcttttagatgaagtaatgaaaagtctgtctgtctcttctgacttt
ttgggaaaagacaaaccagttagctgtggtctggccaggtcagtaagtggaaaaacccca
ggggacttctatgatagatggacaactaagcctgagtttttgagacctggtcctcgaaaa
actgaagatacctacttcattagttctgcaggaaaacctacaccaggcactcaaggaaag
ataaaattagtaaaagaatcttctctgtcacgacaatcaaaagatagtaacccttatgcc
actttacctcgtgcaagcagcgtgatctcaactgccgaaggaactacacgaaggacaagc
atccatgattttttgaccaaggacagtagactgcctatatcagttgattcatcaccagct
gctgctgacagcaacactactgcagcatctagtgagtaccatttacaccagtggtcctct
gatatacttgacagcccaacacatactataggttcttgtgcccaaaatgatttagctata
gacatgcctgagtctctatatgtgcaggctagaaattcaagaacagaaaggtcacatttt
ctaaaccaaacttttgccactattaagatgcctagtggtgcattcggaatgttggcaaaa
gatagcatagggccatttactgtggcccattcatctcagccgttcttatccctcaataca
gaattagttagtaacataagtgggttacctcctaggccagtcaccagaataactgaccag
gcttctgcctttttggataaacctgcacagaaagaaaatgaacagttttctgatcatcag
aaccctagtaacagtaacctacagttttctataaatagcaacaatcttgtcactcctgca
tgcctctgtcctgatgacacagaagctgcattgttggtttctgaggataatcaaactgtt
tggtatgaatatggttgtatatga
DBGET
integrated database retrieval system