Macaca mulatta (rhesus monkey): 719698
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Entry
719698 CDS
T01028
Symbol
COL20A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
mcc
Macaca mulatta (rhesus monkey)
Pathway
mcc04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
719698 (COL20A1)
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
719698
NCBI-ProteinID:
XP_028684541
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All DBs
Position
10:98506008..98542568
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AA seq
1363 aa
AA seq
DB search
MAWPLPLHSPSTMSSRAPAHLGLGLCLWLWLSTTLGREQGPASGHLRLTVLPEDRLQMKW
RESEGSGLGYLVQVQPMAGDSEQEVILTTKTPKATVGGLSPSKGYTLQIFELTGSGRFLL
ARREFVIEDLKSSSLDRNNQRPLSNGAPEPTPSLMGSSDPEQASEPRVAFVPSRDPPIPA
SPQFRCLPPVPADMVFLVDGSWSIGHSHFQQVKDFLASVIAPFEIGPDKVQVGLTQYSGD
AQTEWNLNSFGTKEQVLAAVHRLRYKGGNTFTGLALTHVLGQNLQPAAGLRPEAAKVVIL
VTDGKSQDDVHTAARVLKDLGVNIFAVGVKNADEAELRLLASPPRDITVHNVLDFPQLGA
LAGLLSRLICQRLQDGGPRRGPAVAPALDTLPAPTGLVLSQVTSSSIHVSWTPAPRLPLK
YLIVWRASRGGTPREVVVEGPAASAELHNLTSRTEYLVSVFPIYEGGVGEGLRGLVTTAP
LSPPRALTLATVTPRTIHLTWQPSAGATHYLVRCSPAFSKGEEEEREVQVRWPEVLLDGL
EPGRDYEISVQSLRGPESSEARGIRARTPVLAPPRHLGFSDVSHDTVRVIWEGAPRPVRL
VRVTYVSSEGGHSGQTETPGNATSAVLGPLSSSTTYTVRVTCLYPGGGSSTLTGQVTTKK
VPSPSQLSMTELPGDTVQLAWVAAAPSGVLVYQIKWTPLGEGKAHEISVPGNLGTAVLPG
LGRHTEYDVTILAYYRDGARSDPVSLRYTPSTVNRSPPSNLALASETPDSLQVSWTPPRG
RVLHYRLTYTPASGSGPEKSVSVPGPRSHVTLPDLQAATKYRVLVSAVYAAGRSEAVSAT
GQTACPALRPDSSLPGFDLMVAFGLVEKAYASIRGVAMEPSAFGGTPTFTLFKDAQLTRR
VSDVHPAPLPPEHTIVFLVRVLPETPREAFALWQMTAEDFQPVLGVLLDAGRKSLTYFHR
DPRAALQEATFDPQEVRKIFFGSFHKVHVAVGRSKVGLYVDCRKVAERPLGEVGSAPSAG
FITLGRLAKARGPRSSSAVFQLQTLQIVCSDTWADEDRCCELPASRDGETCPAFVSACSC
SSETPGPPGPQGPPGLPGRNGTPGEQGFPGPRGPPGVKGEKGDHGLPGLQGPPGHQGIPG
RVGLQGPKGMRGLEGTAGLPGPPGPRGFQGMAGARGTGGERGPPGAVGPTGLPGPKGERG
EKGEPQSLATLYQLVSQACESAIQTHVSKFDSFHENTRPPMPILEQKLEPGTEPLGSPGT
RSKALLPGEWRHGSRHLEGRGEPGAVGQTGSPGQQGASTQGLWERQDIFCTVPRNPAPSS
MVCLDTKSDHIWKSQEKSSGSTCRWKEREGATLAKAHPTPLAL
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atggcatggcctcttcccctccacagcccgagcaccatgagctcccgagcccctgcacac
ctcggcctcggcctctgcctctggctgtggctgagcaccactctgggaagagagcaagga
ccagcaagtggccacctgaggctgactgtgctgcctgaggaccggctacagatgaagtgg
agagagtcggaggggagcggcctcggctacctggtgcaggtgcagcccatggcaggggac
tcggaacaggaggtgatactgaccaccaagacccctaaggccacagtggggggcctgagc
ccctccaagggctacacgttgcagatcttcgagctcactggctctgggcgcttcctgctg
gctcggagggagtttgtgattgaggatctgaagagtagctccttggacaggaacaaccag
agacctctcagcaatggagccccggagcccaccccctccctcatggggagctcagaccct
gagcaggcttccgagccccgagttgcctttgtgccaagccgggatccgcccattcctgcc
agcccccagttccgctgcctaccccctgtgcctgctgacatggtcttcctggtggacggg
tcctggagcatcggccacagtcactttcagcaggtcaaggacttcctggccagcgtcatt
gcaccctttgaaatcgggccggataaggtccaagtaggcctgactcagtacagcggcgat
gcccagactgagtggaacctgaactccttcggcaccaaggagcaggtgctggcagctgtg
caccgcctccgctacaagggggggaacacgttcacaggcctcgccctgacccatgtgctg
gggcagaacctgcagccggcggccggcctccgtccagaggcggccaaggtggtgattctg
gtgacggatggcaagtcccaggacgatgtgcacactgctgctcgtgtcctcaaggacctg
ggcgtgaacatcttcgctgtgggtgtgaagaacgccgatgaggctgagctgaggctcctg
gcgtccccgccgcgggacatcaccgtccacaacgtgctggacttcccgcagcttggcgca
ctggctggcctgctcagtcgcctcatctgccagaggctgcaggatgggggcccgcggcgg
ggcccagcagtggctccagccctggacaccctccccgcccccaccggcctggtcctgagc
caggtgacctcctccagcatccacgtgtcctggactccagccccccggctccccctcaag
tatctgattgtttggcgagcctccagaggtggcacccccagggaggtggtggtggagggg
cctgccgcctccgcagagctgcacaacctgacctcccgcacggagtacctggtctccgtg
ttccccatctacgagggcggggttggcgagggcctgcggggcctggtgaccacagcacct
ctgtctccgccccgggcgctgaccctggccacagtgactcccagaaccatccacctcacc
tggcagccctcggccggggccacccactacctggtgcgatgctcacctgctttctccaag
ggtgaggaggaggagcgagaggtgcaggtgaggtggcccgaggtgctgctggatggcctg
gaaccaggcagggactatgagatctcggtgcagagcctgcgaggccctgagagcagcgag
gcccggggcatccgtgccaggacccccgtcctggcccccccgagacacctgggcttctca
gacgtgagccacgacacagtgcgagtgatctgggagggcgccccaaggcctgtgcgcctg
gtcagggtcacctatgtctccagcgagggtggacactcggggcagacagagactcctggg
aatgccacctcggccgtgctggggcccctctcttcctccaccacctacactgtccgcgtc
acctgcctctaccctgggggtggctcctctacgctgactggccaggtcaccaccaagaaa
gttcccagcccaagccagctgtccatgacggagctgccaggggacacagtccagctggca
tgggtggccgcagccccatctggggtgcttgtctaccagatcaagtggacgcccctggga
gaggggaaggctcacgagatctctgtcccagggaacctcggcacggccgtcctgcctggc
ctagggaggcacacggagtatgacgtcaccatcctggcctactacagggatggcgcccgc
agtgaccctgtgtccctccgctataccccgtccacagtgaacaggagccccccctccaac
ctggccctggcctcggagacccccgacagcctgcaggtcagctggacacccccacgtggc
cgcgtgctccactaccggctcacctacacgcccgcctctggctcaggaccggagaaatcc
gtctccgtgccaggacccaggagccacgtgacactccccgacctgcaggcagccaccaag
tacagggtcctggtctcagctgtctacgcagcaggcaggagtgaggctgtgtctgccacc
ggccagacagcctgcccagccctccgcccggacagctccctcccagggtttgacctgatg
gtggccttcggcctggtggaaaaggcttacgcttccatccggggcgtggccatggagccc
tctgccttcggtgggaccccaaccttcacgcttttcaaggacgcccagctgacaagacgg
gtcagtgacgtccacccagccccgctccctccagagcacaccatcgtcttccttgtgcgc
gtgcttcccgagacgccccgtgaggcctttgcgctgtggcagatgacggccgaggacttc
cagcccgtcctcggggttctgctggacgccgggaggaagtccctgacctacttccaccgc
gaccccagggctgccttgcaggaggccaccttcgacccgcaggaagtgaggaagattttc
ttcgggagcttccacaaggtgcacgtggctgtgggccgctccaaggtcgggctctatgtg
gactgccgaaaggtggctgagcggcccctcggggaggtgggcagcgcgccctctgccggc
ttcatcacactggggaggctggccaaggccaggggcccccggagcagctcagccgtgttt
cagctccagacactgcagatcgtgtgcagtgacacctgggccgacgaggaccggtgctgt
gagctccctgcctcgagggatggagagacctgcccggccttcgtgtctgcctgctcctgt
tcctcagagacccctgggcccccagggccccagggacccccaggcctccctgggaggaac
ggcactccgggagagcagggcttccccgggcccaggggtccaccaggggtcaaaggagag
aaaggagaccatgggctcccaggcttgcaagggccacccggccaccagggcatccccggg
agagttggcctccagggaccaaagggaatgagaggcctggagggaactgctggcctgccc
ggaccccctggccccagggggttccagggcatggcaggggccaggggcactggtggagag
cgaggacccccaggggctgtggggcccacagggctgccggggcccaaaggggaacgagga
gagaagggcgagccgcagtccctcgccaccctctaccagcttgtgagccaggcctgtgag
tccgccatccagacacacgtgtcaaagtttgactccttccacgagaacaccaggccccca
atgcccatcttggagcagaagctggagccgggcactgagcccctggggtcccctggcacc
cgcagcaaggccctgcttcctggagaatggaggcatggtagccgccacctagagggcaga
ggggagcctggagctgttggtcagacgggcagccctgggcagcagggggctagcacccag
ggcctctgggagcgacaggacattttctgcactgtcccgaggaaccctgcgccttcctcc
atggtttgtctggacaccaagagcgaccacatctggaaaagccaggagaaaagctcagga
agcacctgcaggtggaaggagagggaaggagcaaccttggccaaggcccaccccacgccc
ttggctctgtag
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