Macaca mulatta (rhesus monkey): 721919
Help
Entry
721919 CDS
T01028
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
mcc
Macaca mulatta (rhesus monkey)
Pathway
mcc04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
721919 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcc04147
]
721919 (COL18A1)
00535 Proteoglycans [BR:
mcc00535
]
721919 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
mcc00536
]
721919 (COL18A1)
Exosome [BR:
mcc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
721919 (COL18A1)
Proteoglycans [BR:
mcc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
721919 (COL18A1)
Glycosaminoglycan binding proteins [BR:
mcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
721919 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
DUF1970
Motif
Other DBs
NCBI-GeneID:
721919
NCBI-ProteinID:
XP_028701066
LinkDB
All DBs
Position
3:complement(1234897..1326278)
Genome browser
AA seq
1754 aa
AA seq
DB search
MAPDPSGCRVLLLLFCCLAAAQADLLNLNWLWFNNKDTSQAATTIPEPQGLLPVQPTADT
TTHVVPQDGSTEPATAPGSPEPPSELLEDSQGTPTSAESPDMPEENIAGVGAKILNVAQG
IRSFVQLWNDTVPTESLARAETRVVEAPVGTLALPGPSSTPQENGTTLWPSSGAPSSPGT
HTTEAGTLPAPTPSPPSLGRPWAPLTGPSVPPPSSGRASLSSSLGGAPAWGSLQDPDSRG
LSPTAAAPSQQLQRPDVRLRTPLLHPLVTGSLGVHAAPSAFSSGLPGAPSQVAVTTLIGD
RGAWVSHAANSAGLGLANNSALLGADPEAPAGRCLPLPPSLPVCGRLGISRSWLPNHLHH
ESGEQVQAAAQVWGGLLRTHCHPFLAWFFCLLLAPPCGRVPLPAPPPCRQFCEALQDTCW
SRLSGGWLPVACASLPAQEDGYCVFIGPAAERVGEEVGLLQLLGDPPPQQITQTDDPDVG
LAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIQPATEGPGVLFAITDSAQAVVSLGVKL
SGVRDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVEGGYVALYVDCEEFQR
MPLARSSRGLELEPGAGLFVAQAGGADPDKFQGMIAELKVRGDPQVGPMHCLDEEGDDSD
GASGDFGSGLADTQELLREEMGTALKPRLPTPPPVTAPPLAGGSSTEDSRSEEIEEQTTV
TSLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGIPGPPGRAGPPGSPCLPGP
PGLPCPVSPLGPVGPALQPVPGPQGPPGLPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFP
GTPGDVGPKGDKGDPGVGARGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRG
PRGFPGPPGPPGVPGLPGEPGRFGVNGSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGK
EGPPGRMGQKGSLGEAGAPGHKGSKGDPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP
GLPAGFDDMEGSGGPFWSTARGADGPQGPPGLPGLKGDPGVPGLRGAKGEVGANGAPGFP
GLPGREGTAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDGAVLSV
PGPEGRPGFAGFPGPTGPKGDLGSKGERGSPGPKGEKGEPGSVFSPDGSALGPAQKGAKG
EPGFRGPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGDAHLGFGMRGMPGPPGPP
GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGTKGEVGPPGPPGQFPFDFLQLE
AEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPPGYPGIPGPKGESIRGQPG
PPGPQGPPGIGYEGRQGPPGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMG
TSSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVRNGFRKVQLEPRTPLPRGTDN
EVAALQPPVVQLHDSNPYPRREFPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSYVH
LRPALPTSPPAHTHRDFQPVLHLVALNSPLPGGMRGIRGADFQCFQQARAVGLVGTFRAF
LSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFAGSEGPLKPGARIFSFDGKDVL
RHPTWPQKSVWHGSDPSGRRLTESYCETWRTESPSVTGQASSLLGGRLLGQNAASCHHAY
IVLCIENSFMTASK
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccccagcggctgccgcgtcctgctgctgctcttctgctgcctggcagct
gctcaggccgacctgctgaacctgaactggctttggttcaataataaggacaccagccaa
gcagctaccacgatccctgagccccaggggctcctgcctgtgcagcccacagcagacacc
accacgcatgtggtcccccaggatggttccacggagccagcgacagcccctggcagccct
gagccaccctcagagctgctggaggacagccagggcacccccacttctgccgagagcccg
gacatgccagaggagaacattgccggtgtgggagccaagatcctgaacgtggcccaaggc
atccggagctttgtccagctgtggaatgacactgtccccactgagagcttggcccgggca
gaaacgcgggttgtcgaggctcctgtgggcaccctcgccctccctgggccttccagcacc
ccccaggagaatgggaccactctgtggcccagcagtggcgctcccagctctccgggcacc
cacacgaccgaggctggcaccctgcctgcacccaccccatcgcctccctccctgggcagg
ccctgggcaccactcacggggccctcagtgccaccaccatcctcaggtagagcttctctc
tcctcctcgctgggcggggcccctgcctggggaagcctgcaggacccggacagccgagga
ctctcgcccaccgcagccgctcccagccagcagctccaacgccctgacgtccgcctgcgc
acaccacttctgcaccccctggtgacgggctccctgggcgtgcacgcggccccctctgcc
ttctcctctgggctcccgggcgcaccgtctcaggtcgcagttaccactttaatcggggac
agaggtgcttgggtctcccacgcggctaactctgcggggctgggtcttgctaataactct
gccctgctcggggctgaccctgaggcccctgccggtcgctgcctgcccctgccgccctcc
ctgccggtctgtggccgcctgggcatctcgcgctcctggctgcccaaccacctccaccat
gagagcggcgagcaggtgcaggctgcggcgcaggtgtgggggggcctgctgcggacgcac
tgccaccccttcctcgcctggttcttctgcctgctcctggccccaccgtgcggcagggtc
ccgctgcccgccccgccaccctgccgccaattctgcgaggccctgcaggacacgtgctgg
agccgcctgagtgggggctggctgcctgtcgcctgtgcctcgctcccagcccaggaggac
gggtactgtgtgttcattgggccggctgcagagcgcgtcggcgaggaggtggggctactg
cagctccttggggaccctccaccccagcaaatcacccagacggatgaccccgacgtcggg
ctggcctacgtctttgggccagatgccaacagcggccaagtggcccggtaccacttcccc
agcctcttcttccgcgacttctcgttgctgttccacatccagccggccacggagggccca
ggggtgctgttcgccatcacagactcggcgcaggcagtggtctcgctgggcgtgaagctc
tctggggtgcgggacgggcaccaggacatctccctgctctacacggagccaggcgcaggc
cagacccacacagccgccagcttccggctccccgccttcgtcggccagtggacacactta
gcgctcagtgtggagggtggctacgtggccctctacgtggactgtgaggagttccagaga
atgccgcttgctcggtcctcacggggtctggagctggagcccggcgccgggctctttgtg
gctcaggcaggaggagcggaccctgacaagttccaggggatgatcgctgagctgaaggtg
cgcggggacccccaggtgggccccatgcactgcctggacgaggaaggcgatgactcagat
ggggcatctggagactttggcagcgggctcgctgacacccaggagcttctcagggaggag
atgggcacagccctaaaaccgaggctccccacgccacccccggtcactgctccacccttg
gctggaggcagcagcacggaagattccagaagtgaagaaatcgaggagcagaccacagtg
acttcattaggagctcagacacttcctggctcagattctgtctccacgtgggacgggagt
gtccggacccctgggggccgcgtgaaagagggcggcctgaaggggcagaaaggggagcca
ggtattccaggcccgcctggccgggcaggccccccaggctccccctgcctgcctggtccc
ccgggtctcccgtgcccggtcagtcccctgggtcctgtaggcccagccttgcaacctgtc
cccggaccgcaaggacctccagggctgccagggagggacggcacccctggaagggatggc
gagccgggtgaccctggtgaagacggaaagccgggcgacaccgggccgcagggcttcccc
gggactccaggggacgtgggccccaagggtgacaagggagaccccggggttggagcgaga
ggacccccaggaccccaagggcctccggggcccccaggaccctccttcagacacgacaaa
ctgaccttcattgacatggagggatctggcttcggtggtgatctggaggccctgcggggt
cctcgaggctttcccggaccccccggaccccccggtgtcccaggcctgcccggcgagcca
ggccgctttggggtgaacggttctgacgtcccaggacctgccggccttcctggtgtgcct
gggcgcgagggtccccccgggtttcccggcctcccgggacccccaggccctccaggaaaa
gaggggcccccaggaaggatggggcagaaaggcagcctgggtgaagcaggcgccccagga
cataaggggagcaagggagaccccggtcctgctggcgctcgcggggagagcggcctggca
ggagcccctggacccgctggaccaccaggcccccctgggccccctgggccaccaggacca
ggactccccgctggatttgatgacatggaaggctccggggggcccttctggtcaacagcc
cgaggcgccgatgggccgcagggaccccccggcctgccaggactgaagggggatcctggt
gtgcctggcctgcggggagccaagggagaagttggagcaaacggagcccctgggttcccc
ggcctccctggcagagagggcactgctgggccccaggggccaaagggagacagaggcagc
cggggagaaaagggagatccagggaaggacggagtcgggcagccaggcctccccggaccc
cccggacccccggggcctgtggtctacgtgtcggagcaggatggtgccgtcctgagcgtg
ccgggacctgagggccggccgggtttcgcaggctttcccggacctacaggacccaagggc
gacctgggctctaagggtgaacgaggctccccgggacccaagggtgagaagggtgaaccg
ggcagcgtcttcagccccgacggcagtgccctgggccctgcccagaaaggagccaaggga
gagccgggcttccgaggacccccgggtccgtacggacggccggggcacaagggagagatt
ggcttccctggacggccgggtcgccccgggatgaacggattgaaaggagagaaaggggag
ccgggagatgcccaccttggatttggcatgaggggaatgcccggccccccagggcctcca
gggcccccaggccctccagggactcctgtttacgacagcaatgtgtttgctgagtccagc
cgccccgggcctccaggattgccagggaatcagggccctccaggacccaagggcaccaaa
ggagaagtgggccccccgggaccaccagggcagtttccattcgacttccttcagttggag
gctgaaatgaagggggagaagggagaccgaggtgatgcaggacagaaaggcgaaaggggt
gagcccgggggcggcggcttttttggctccagcctgccaggcccccccggtcccccaggc
ccacctggctaccctgggattccaggtcccaagggagagagcatccggggccagcctggc
ccacctggacctcagggaccccccggcatcggctacgaggggcgccagggccctcccggc
cccccaggcccccctggccccccagggcccccttcatttcccggccctcacaggcagact
atcagcgttcccggccctccgggcccccctgggccccctgggcctcctggaaccatgggc
acctcctcaggggtgaggctctgggccacgcgccaggccatgctgggccaggtgcacgag
gttcccgaggggtggctcatcttcgtggccgagcaggaggagctctacgtccgtgtgcgg
aacgggttccggaaggtccagctggagccccggacgccacttccacgagggacggacaac
gaagtggctgccttgcagccccctgtggtgcagctgcacgacagcaacccctacccccgg
cgggagttcccccaccccaccgcaaggccctggcgggcagacgacatcctggccagcccc
cctcgcctgcccgagccccagccctaccctggagccccgcaccacagctcctacgtgcac
ctgcgtccggcgctccccacgagcccacccgcccacacccaccgcgacttccagcccgtg
ctccacctggttgcgctcaatagcccgctgccaggcggcatgcggggcatccgcggggcc
gacttccagtgcttccagcaggcacgggccgtggggctggtgggcaccttccgtgccttc
ctgtcctcacggctgcaggacctgtacagcatcgtgcgccgtgccgaccgcgcagccgtg
cccatcgtcaacctcaaggatgagctgctgtttcccagctgggaggctttgttcgcaggc
tctgagggtccgctgaagcccggggcacgcatcttctcctttgacggcaaggacgtcctg
aggcaccccacctggccccagaagagcgtgtggcatggctcggaccccagcgggcgcagg
ctgactgagagctactgcgagacgtggcggacagagtctccctcggtcacaggtcaggcc
tcctccctgctggggggcaggctcctagggcagaatgccgcaagctgccaccacgcctat
atcgtcctctgcatcgagaacagcttcatgactgcctccaagtag
DBGET
integrated database retrieval system
