Mycoplasma crocodyli: MCRO_0156
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Entry
MCRO_0156 CDS
T01205
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mcd
Mycoplasma crocodyli
Pathway
mcd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCRO_0156 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcd03021
]
MCRO_0156 (rpoA)
03400 DNA repair and recombination proteins [BR:
mcd03400
]
MCRO_0156 (rpoA)
Enzymes [BR:
mcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCRO_0156 (rpoA)
Transcription machinery [BR:
mcd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MCRO_0156 (rpoA)
DNA repair and recombination proteins [BR:
mcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MCRO_0156 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ADE19568
UniProt:
D5E4Y4
LinkDB
All DBs
Position
140980..141981
Genome browser
AA seq
333 aa
AA seq
DB search
MEKFQKLDYLEVPSSTTSDFEGTFNLQPLERGFATTLGVALRRVLLSNITSLAPFCVRIE
GVTHEFQGITGVIEDVPSLIMNLRKVRFSYDPELVKDDEIIKVELKADQIGEINSRYLEV
VDNLNVEVIDHNIHIADVALENSLRLELYLRPGRGFVSSEENKALVSKLETQLETKIKKG
KFIAVDSNFSPVEKVNYVVSELNSSSVKIEEKLEFNVITDGTVKPKDAIKQAAEILISHF
KVIGNVDEIKDSIFETSEDKVLDVQEQDIDINQLGLSVRSLNALRRIGKTKASEVAKMTY
DELEQTKNLGKKSLDEIITKIKEHGFELRKGDE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttcaaaaattagactatttagaagtaccatcttcaacaactagtgatttt
gaaggaacatttaacttacaaccattagagagaggatttgcaacaacacttggtgtagcg
ctaagaagagtgttgttatcaaacatcacctctctagctcctttctgtgtaagaatagaa
ggtgtaactcatgaatttcaaggaattactggggttatagaagatgtaccaagccttata
atgaatttaagaaaagttcgttttagttacgatcctgaattagtaaaagatgacgaaata
ataaaggtagaacttaaggctgatcaaattggagaaataaactctagatacttagaagta
gtagataacctaaacgttgaagttatcgatcataatattcatattgccgacgttgcttta
gaaaactcgttaagattagaattatatctacgtccaggaagaggatttgtttcaagtgaa
gaaaacaaagctttagtaagcaagttagaaacacaattagagacaaaaattaaaaaaggg
aaattcattgctgttgattcaaacttttcaccagttgaaaaagttaactatgtagtttct
gaattaaactcatctagtgttaaaattgaagaaaaattagaattcaatgttattactgat
ggaacagttaaacctaaggatgctattaaacaagcagcagaaattttaatttcacacttt
aaagtaattggaaatgttgacgaaataaaagatagtatttttgaaacatctgaagataaa
gttttagatgttcaagaacaagacattgatattaatcaactaggactttcagttcgttct
ctaaatgctttaagaagaattggaaaaactaaagcaagcgaagttgcaaaaatgacttat
gatgaattagaacaaaccaagaatttaggtaagaaatcacttgatgaaattattaccaaa
attaaagaacacggttttgaattaagaaaaggagatgaataa
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