Mycoplasma crocodyli: MCRO_0231
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Entry
MCRO_0231 CDS
T01205
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcd
Mycoplasma crocodyli
Pathway
mcd03420
Nucleotide excision repair
mcd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MCRO_0231 (pcrA)
03430 Mismatch repair
MCRO_0231 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcd03400
]
MCRO_0231 (pcrA)
Enzymes [BR:
mcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MCRO_0231 (pcrA)
DNA repair and recombination proteins [BR:
mcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCRO_0231 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MCRO_0231 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
ADE19532
UniProt:
D5E541
LinkDB
All DBs
Position
complement(219729..221903)
Genome browser
AA seq
724 aa
AA seq
DB search
MIRNRINLIKDLNTQQAEAVKYFDTHLRIIAGAGAGKTKVLTRKIAYLINEMGVLPRQIL
AVTFTNKACKEMYQRVAQYCSTSIHQINIFTFHAFCGHILRREAALLGYKNDFQIIDEAD
KTMILKNIYKDLDISSHEISFSSMIQQISWAKNAHMSVDDLAKHINESVNDIVPKVYNLY
TEFLIKKGCLDFDDLILKVEYLFDKNPDIAEKWSKYFSHILVDEFQDTSTSQYRIIQKVC
NPNTHLTIVGDPDQTIYNWRGANVNLILDFDKDYPDAKTIVLNKNYRSTKLILRAANKLI
RNNNNRFSKDLDTDNPNGKDIEFFHAFNMEAEARWVVQKINELRKQKIQLKNIAILYRSN
FYSRAFEEELINENISHKIFNGVKFFQRSEIKDALAFLRVIYDGSDIALERIINVPKRGI
GDVTLAKLKKYAEDHNLTLHDYLMKFYKSLPLSPKLIKEQIFPFLSIIVKYRSALNNNSI
SIVLSKMLEEIGFYKEIKQDQNISGSAIDNVKELIRSIENWESKNKDKTIKEYLELVSLL
SASDEFDSDPNYISLMTVHSAKGLEFDNVFVVGLTEEIFPSRKALVLNNLTNPSDGLEEE
RRLAYVAITRAKDRLFISDSRGLLFETNKEKEPSRFIEEMGVNLEDYIIERNFTKEIDLS
NEFENETHSSDKIIVGDIVSHTMFGEGVVLDVSGAEITVEFIKNTNAKVRTLRKHHPSLR
VISK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgataagaaataggattaatttaattaaagatttaaatactcaacaagcagaagccgtt
aagtattttgacactcatctaagaattattgctggtgctggtgctggaaaaacaaaggtt
ttaacaagaaaaattgcatatttaattaatgaaatgggagttttaccaagacaaatttta
gctgttacatttacgaacaaagcatgtaaagaaatgtatcaaagagttgcacaatattgt
tctacatcaattcaccaaataaatatttttacatttcatgctttttgtggccacatcttg
agaagagaagcagcacttctaggatacaaaaatgactttcaaataatagatgaagcagac
aagacaatgatacttaaaaatatctataaagatttggacatttcatctcatgaaatttct
ttttcatctatgatacagcaaatttcatgagctaagaacgcacatatgagtgttgatgat
ttagcaaaacacattaatgaatcagtaaacgatattgttccaaaagtttataatttgtat
acagaatttttaattaaaaaagggtgtttagactttgatgatttgattttaaaagtggaa
tatttatttgataaaaatcctgatatagctgaaaaatgaagtaaatatttttcacatatt
cttgtcgatgaatttcaagatacatcaacttctcagtatagaataattcaaaaggtttgc
aatccaaacacacacttaacaatagttggagatcctgaccaaacaatatataactggcgt
ggagcaaatgtaaatttaattcttgattttgataaagactacccagatgctaaaacaata
gttctaaataaaaactaccgttctacaaaattaattttaagagctgctaataaacttata
agaaataataacaatagatttagcaaagatcttgatactgataatccaaacggaaaagat
attgaatttttccatgcttttaatatggaagcagaagctagatgagtagttcaaaaaata
aatgaattaagaaagcaaaaaattcaattaaaaaatattgccatcctttatagatctaac
ttttactcaagagcttttgaagaagaacttattaacgaaaatatctcacacaaaattttt
aatggtgttaaatttttccaaagatcagaaattaaagatgctttagcttttttaagagtt
atatatgatggttcagacatcgcccttgaaagaattattaatgttccgaaaagaggaatt
ggtgatgtaacacttgctaaacttaaaaaatatgcagaagatcataatttaactctacat
gattatttaatgaaattttataaatcattaccattaagtccaaaacttattaaagaacaa
atttttccatttttatcaattattgttaaatatagaagtgctttaaacaataatagtatt
tcgatagtattaagtaaaatgctagaagaaattggattttataaggaaattaaacaagac
caaaatataagcggatcagcaattgataacgttaaagaattgataaggtcaattgaaaac
tgagaaagcaaaaataaagataaaacaataaaagaatatttagaattggtttcattatta
agtgcttcagatgaatttgattcagatcctaactatatttcattaatgactgtccactct
gcaaaaggattagaatttgataatgtctttgttgttggtctaactgaagaaatttttcca
agtagaaaagctcttgttttaaataacttgacaaatcctagtgatggattagaagaagaa
agaagattagcttatgttgctattacaagagctaaagatagattatttatctctgattcg
cgcggtttattatttgaaacaaataaagaaaaagaaccttcaaggttcattgaggaaatg
ggtgttaatcttgaagattatattatcgaacgtaatttcacaaaagaaatcgatctttca
aacgagtttgaaaacgaaactcactcatcggacaaaataattgtaggtgatatcgtttca
cacactatgtttggtgaaggtgttgtacttgatgtaagtggtgctgaaataacagttgag
tttattaaaaatacaaatgcaaaggtacgcactcttagaaagcatcatccatcattaagg
gttatttctaaataa
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