Mycoplasma crocodyli: MCRO_0596
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Entry
MCRO_0596 CDS
T01205
Name
(GenBank) hypothetical beta-CASP family DNA/RNA hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mcd
Mycoplasma crocodyli
Pathway
mcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCRO_0596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcd03019
]
MCRO_0596
Messenger RNA biogenesis [BR:
mcd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MCRO_0596
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Anti-Pycsar_Apyc1
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
ADE19861
UniProt:
D5E620
LinkDB
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Position
complement(700919..702766)
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AA seq
615 aa
AA seq
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MLPTRLIPLGGVQEIGKSTLLIEHNNHIFIVDAGIKFADTFTTGIKGIIPDYSYLNEPGK
IIEGLFITHGHEDHIGGVVHLLKQVFVKKIFAPRIAIQYLKLKFEEHGIVQKNHEFIEIE
KSAIYNFDEGCKVDFWTAQHSIPDAFGVRITTPNGSVMCTGDFRFDYTPIGNYTDFSRLD
QMGKEGLTVLMSDSTNAMRPFHSPSEKDIITDIERHLVEAKGKIILTAFASNLTRVKVII
DLAAKLKKKVITFGRSMIQGVKIGRKLGYIDVSSDIFVDKKHLSKVKDSDLVILTTGSQG
EQLAALSRMSYGKHATVKIAKGDTIIFSSSPIPGNRMVIELLINRLYKLGAIIKENGPDG
YLHTSGHAYRYEHDKIFQLTKPKYFLPYHGEYRMSIVHGQSAIENGVDAKNVIIPQAGVV
YNMLDQVVTETNEKINYGPIYIDGNNALNLNANIIRERANLSESGFVSIVLVINKKTNSI
IGKPHLISRGCFFVKNSTALVEETKRISHGTTLHFIKNTPDWNVVDLKQIISDRLKNLFY
KEKRRNPIIIPVILFNDDETDKNLQGLKINFGQIKSQENDRTSSNLKKQLSDLKSKLIEE
DKEDIYDDLDEEDEK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgctaccaacaagattaattcctttgggtggtgttcaggaaatagggaaatccacctta
ttaatagagcataacaaccatatttttatcgttgatgcaggtataaaatttgcagatact
tttacaactggaatcaaaggaatcatacctgattattcatatttaaacgaaccaggaaaa
ataattgaagggctttttattacacacggtcatgaagatcatattggaggagtagttcac
cttttaaagcaagtttttgttaaaaaaatatttgcaccaagaatagcgatccaatatcta
aaacttaaatttgaagaacacggtattgttcaaaaaaatcatgaatttattgaaatagaa
aaaagtgcaatttacaattttgatgaaggttgcaaagttgatttttgaacagctcaacat
tcaatacctgatgcttttggagtaagaatcacaactccaaatggtagcgtaatgtgtact
ggagattttagatttgattatactccaataggaaattacactgatttttctagattagac
caaatgggtaaagagggattgactgttcttatgtcagattcgacaaacgctatgcgtcca
tttcactctccttctgagaaggatataataaccgatattgaaagacatttagttgaagca
aagggtaaaataatattaactgctttcgcttcaaatttaacacgtgttaaagttattatt
gatttagcagctaaacttaaaaagaaagttattacctttggaagatcaatgattcaaggt
gttaaaataggtagaaaacttggttatattgatgtgtcttctgatatttttgttgataaa
aaacatctttcaaaagttaaggatagtgacttagttatattaacaaccggttctcaaggg
gaacagttagctgctctttctagaatgtcatatggaaaacatgcaactgtcaaaatagca
aaaggcgacactataattttttcttcaagtccaattcctggaaatagaatggtaatagaa
ttattaattaatagactttacaaattaggtgcaatcattaaggaaaatggaccagatgga
tatttacatacatcaggacatgcttatagatatgaacatgataaaatttttcaacttact
aaaccaaaatatttcctaccatatcatggagaatatagaatgagtatagttcacggtcag
agtgctatcgaaaatggagttgatgcaaaaaatgtaatcataccacaagcaggcgttgtt
tacaatatgttagatcaagttgtaaccgaaacaaacgaaaaaataaattatggaccaatt
tatatagatggaaataatgctttaaatcttaatgcaaacattattagagaaagagctaat
cttagtgaatctggtttcgtttctatagttttggttattaataaaaaaacaaattctatt
ataggtaagccacatttgataagcagaggatgtttctttgttaaaaattccacagcttta
gtagaagaaacaaagcgtatttcacatggaaccacattgcattttatcaagaacactcca
gactgaaatgttgtagatttaaaacaaataataagcgatagattaaagaatttgttctat
aaagaaaaaagaagaaatcctattattattcctgtgatactttttaatgatgatgaaaca
gacaagaatttacaaggtttaaaaattaattttggtcaaatcaaatcacaagaaaatgat
agaacatcatcaaatcttaaaaaacaattgagtgatcttaaatcgaaattaattgaagaa
gacaaagaagatatttatgatgatttagatgaggaagatgaaaaataa
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