Mycoplasma crocodyli: MCRO_0644
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Entry
MCRO_0644 CDS
T01205
Symbol
uvrB
Name
(GenBank) excinuclease UvrABC system, helicase subunit (UvrB)
KO
K03702
excinuclease ABC subunit B
Organism
mcd
Mycoplasma crocodyli
Pathway
mcd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MCRO_0644 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcd03400
]
MCRO_0644 (uvrB)
DNA repair and recombination proteins [BR:
mcd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCRO_0644 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MCRO_0644 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_22
UvrD_C
Helicase_C_2
AAA_30
DPPIV_rep
P-loop_SecA
Flavi_DEAD
AAA_16
LuxC
Motif
Other DBs
NCBI-ProteinID:
ADE19696
UniProt:
D5E658
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All DBs
Position
752973..754946
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AA seq
657 aa
AA seq
DB search
MSIYQLRANYKPSGDQPRAIQELSEGVAEGLKHQVLEGVTGSGKTFTIANVIQNFDRPVL
VLSHNKTLASQLYSELKSFFPHNAVEYFVSYFDYYRPEAYIPTSDTYIEKTSKTNQDIEL
LRMSTINSLLRRRDTIVVASVSSIYGALNPQEYQKGIFEIFKGMDFNFKEFLRTLIKIKY
DRNDIDNPPATFAVRGDTVFISPADSDEFLLRIDFFGDTIEAIYKVDKVTKNIIKEFKVY
AIYPGEAYTVENSIFDKILPMIQEELNQRIKYFNENNKLLEAQRISERVKNDMDEMAEYG
FCGGIENYTMYLDGRDFNQRPFTLFDYLPNDTIIFLDESHMMIPQLHGMYKGDRARKETL
VNYGFRLPSALENRPLKFHEFEQAFDFQKIYISATPNEYEIDQSQGLVTKLYVRPTGLLD
PILEMRPTKNQIEDIFDEIKIQNDKNQRTIVLTTTKRSAEELSSYMQKRNIKSAYIHSEY
DTFKRNEILRKLRKGIYDVVIGINLLREGIDLPEVSLVVVLDADKEGFMRNRSSLIQIAG
RAARNKDGRVIFYADVETKSLKATFEDNKEKRELQIAYNKKHNITPQTIYKEIAEPIQGH
DIDNALEAVLAKDKKITKQDKEELIKKIKVQMKQAAKDLDYERAIELRDLIIEIEKS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatatatcaattaagagcgaattataaaccaagtggagatcaaccaagagcaatt
caagaactaagtgaaggagtagccgaaggactgaagcaccaagttttagaaggggttacc
ggttcaggaaaaacatttacaatagcaaatgttatccaaaatttcgaccgtcctgttcta
gttttatcacacaacaaaacacttgcaagtcagttatatagtgaactaaaatcgtttttt
ccacataatgctgtggaatattttgttagttattttgattattatagaccggaagcttat
atacctacatcagatacatatattgaaaaaacatcaaaaacaaaccaagatatagaacta
cttagaatgtcaaccattaattctcttttaagaagaagggatactattgtagttgcttca
gtaagttcaatatatggagcacttaatcctcaagaatatcaaaaaggaattttcgaaatt
tttaaaggaatggattttaattttaaagagtttttaagaactcttataaaaataaaatat
gatagaaatgatatagataacccgcctgcaacttttgctgtaagaggggatacggttttt
atttcaccagctgatagtgatgagtttttattaagaattgatttttttggcgatactatt
gaggcaatttataaagttgataaagttactaaaaacataataaaagagtttaaagtttat
gctatttatccaggtgaagcttatactgttgaaaatagtatttttgacaaaattcttcct
atgatacaagaagaattaaatcaaagaattaaatattttaatgaaaataataaactactt
gaagcacaaagaataagtgaacgcgttaaaaacgatatggatgaaatggctgaatatggt
ttttgcggtggaatagaaaattacacaatgtaccttgatggtagagattttaatcaaaga
ccatttactttatttgactatttaccaaacgatacgataatttttcttgatgaatcacac
atgatgattcctcaactacatggaatgtataaaggagatcgagcaagaaaagaaacttta
gttaattatggttttagactacctagcgctctagaaaatagacctcttaaattccatgaa
tttgaacaagcatttgattttcaaaaaatttatatatctgccacacctaatgaatatgaa
atcgatcaatcacaaggacttgtcacaaaactttatgtaagaccaactggtttattagat
ccgattttagaaatgagaccaaccaagaatcaaattgaagatatttttgatgagataaaa
attcaaaatgataaaaatcaaagaacaattgttttaacaactacaaaaagaagcgctgaa
gaattatcttcttatatgcaaaaaagaaatattaaatctgcatatattcattctgaatac
gacacattcaaacgtaatgaaatacttagaaaattaagaaaagggatttatgatgttgtt
atcggaataaacttattaagggaaggaattgacttaccagaagtttctcttgttgttgtt
ttagatgctgataaggaaggatttatgagaaatagatcaagtcttatccagattgctgga
cgtgcagccagaaacaaagatggtagagttattttttatgcggatgttgaaacaaaaagt
ttaaaagcaacttttgaagacaacaaagaaaaacgagaattacaaattgcatataacaaa
aaacacaatattacaccacaaacaatatataaagaaatagcagaacctattcaaggacac
gatatcgacaacgcgcttgaagcagtattggcaaaagataaaaaaattaccaaacaagat
aaagaagaactgatcaaaaaaatcaaggttcaaatgaaacaagcggccaaagatcttgat
tatgaaagagcaattgaacttagagatttaataattgaaatagaaaaaagttaa
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