Mycobacterium canettii CIPT 140010059: MCAN_12671
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Entry
MCAN_12671 CDS
T01585
Symbol
deaD
Name
(GenBank) putative cold-shock DEAD-box protein A homolog DEAD (ATP-dependent RNA helicase deaD homolog)
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mce
Mycobacterium canettii CIPT 140010059
Pathway
mce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCAN_12671 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mce03019
]
MCAN_12671 (deaD)
03009 Ribosome biogenesis [BR:
mce03009
]
MCAN_12671 (deaD)
Enzymes [BR:
mce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MCAN_12671 (deaD)
Messenger RNA biogenesis [BR:
mce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MCAN_12671 (deaD)
Ribosome biogenesis [BR:
mce03009
]
Prokaryotic type
rRNA helicases
MCAN_12671 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
HEM4
UvrA_inter
P-loop_SecA
B_solenoid_dext
Motif
Other DBs
NCBI-ProteinID:
CCC43599
UniProt:
A0AB72XL47
LinkDB
All DBs
Position
1420113..1421804
Genome browser
AA seq
563 aa
AA seq
DB search
MAFPEYSPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTG
TGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGS
PYAVQLAGLSRGAQVVVGTPGRVIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERI
LSETPEYKQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVARKMDA
LTRVLEVEPFEAMIVFVRTRQATEEIAEKLRARGFSAAAINGDVPQAQRERTITALRDGD
IDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELH
LLKAIEKATRQTLTEAQLPTVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHD
VPMADIAAALAVQCRGGEAFLMAPDPPLSRRNRDQRRDRPQRPKRRADLTTYRVAVGKRH
KIGPGAIVGAIANEGGLHRSDFGQIRIGPDFSLVELPAKLPRATFKKLAQTRISGVLIDL
RPYRPPDAARRHNGGKPRRNHVG
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggccttcccggaatattcgcctgcggcgtccgctgcgacgtttgctgacctgcagatt
catccccgcgtcttgcgggcgatcggcgacgtcggttacgagtcaccgacggctatccag
gcggctacgatcccggcgttgatggcaggctccgacgtggtggggctggcgcagaccggc
accggcaagacggcggcatttgcgattccgatgctgtccaagatcgacatcaccagcaag
gtgccccaggcgctggtgctggtgcccacccgggagctggctctgcaggtggccgaggcg
ttcggccgctacggtgcctatctgtcgcaactcaacgtgctgccgatctacggcggatcg
ccgtatgccgtgcaactggccggattgagccgcggcgcgcaggtggtggttggcaccccc
ggtcgtgtgatagaccatctcgaacgggcgaccttggacctgtcgcgggtggactttcta
gtgctcgatgaggccgatgagatgctgaccatgggtttcgccgacgacgttgagcgcatt
ctgtccgagacccccgaatacaagcaggtcgccctgttttccgcgaccatgccgccggcg
atccgcaaactcagcgccaagtacctgcacgatccgttcgaagtcacttgtaaggcgaaa
accgctgtggccgagaatatttcgcagagctacattcaagtagcgcggaagatggacgcg
ctcaccagagtgctcgaagtcgagccgttcgaggcgatgatcgtctttgtccgcaccagg
caggcgaccgaggagattgccgaaaagctgcgtgcccgagggttttccgcggctgccatc
aacggtgacgtcccgcaggcgcagcgggagcggaccatcacggcgctgcgggacggcgac
atcgatatcctggtcgccacagatgtggcggcgcgcggactcgacgtggagcggatatca
cacgtgcttaactacgacatcccgcacgacaccgagtcctatgtacaccggatcgggcgc
accggccgggccgggcgttcgggagccgcgctgatattcgtctcgccacgggagcttcac
ctgctcaaggcgatcgaaaaggctacgcggcaaacgcttaccgaggcgcaattgcccacc
gtcgaggatgtcaacacccagcgggtggccaagttcgccgattccatcaccaatgcgctg
ggcggtccgggaatcgagctgttccgccgactggtcgaggagtatgaacgcgagcacgat
gtcccgatggctgacatcgccgcggcactggccgtgcagtgccgcggcggtgaggcattc
ctgatggcacccgacccgccgctttcgcggcgcaaccgcgaccagcgtcgggaccgtccg
caaaggcccaagcgtagagcggacttgaccacctaccgcgtcgccgtcggcaagcggcac
aagatcggtccaggcgccatcgtcggcgccatcgccaatgagggtgggctgcaccgcagc
gacttcggtcagatccgtatcgggccagacttctcgctagtagaattgccggcgaagctg
ccccgcgcgacgttcaaaaagcttgcacagacccgtatctcgggtgtgctgatcgacctt
cggccataccggccgcccgacgcggcgcgccggcataatggcggcaaaccacggcggaac
cacgtcggatga
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integrated database retrieval system
