Mycolicibacterium celeriflavum: MCEL_13290
Help
Entry
MCEL_13290 CDS
T08164
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mcee
Mycolicibacterium celeriflavum
Brite
KEGG Orthology (KO) [BR:
mcee00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MCEL_13290 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcee03021
]
MCEL_13290 (rpoD)
Transcription machinery [BR:
mcee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MCEL_13290 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BBY43034
UniProt:
A0A1X0C3I5
LinkDB
All DBs
Position
1368844..1370373
Genome browser
AA seq
509 aa
AA seq
DB search
MAATKASPATDEPVKRTATKAAPAKKTAAKSANATAPAKKAAKARTATKAPAKKAAKPAA
SRESGTTATKAPAKRATKAAKTAAPRGRAKKATAADPEATKTDVETDELEADELEAEPGD
DLAVEEADIDLADLEVAVEEPAEEVAAVAEGDTPAAESTDEAAAVEDDEIAEPSEKDKAS
GDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYA
TQLMAEIAERGEKLPAAQRRDMMWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLD
LIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKL
GRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFI
EDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVT
RERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgacaaaggcaagcccggcaaccgatgagccggtgaagcgcaccgctaccaag
gccgcccccgccaagaagacagcggcgaagtccgccaatgcgacggcgccggccaagaag
gccgccaaggcgcgtaccgccaccaaggcgccggcgaagaaggccgccaagccagcggcg
agccgcgaatcgggtaccaccgcgaccaaggcaccggccaagcgagcgacgaaggccgcg
aagacagccgccccccgcggtcgcgccaagaaggccaccgccgccgatccggaggccacc
aagaccgacgtcgagaccgacgaactcgaggccgacgagctggaagccgagcccggcgac
gacctcgcggtcgaggaggccgacatcgaccttgcggatctcgaggtcgccgtcgaggag
cctgccgaggaggttgccgcggtcgccgagggcgacacccccgcggcggagtccacggat
gaggccgccgctgtcgaggacgacgagatcgccgagccgtcggagaaggacaaggcctcc
ggcgacttcgtctgggacgaggaggagtccgaggcgctgcgccaagctcgcaaggacgcc
gagctgaccgcgtcggccgactcggttcgcgcctacctcaagcagatcggcaaggtcgcg
ctgctcaacgccgaggaagaggtcgaactagccaagcgcatcgaggccggtctgtatgcc
acccagctgatggccgagatcgccgagcgcggcgagaagctgcccgccgcgcagcgccgc
gacatgatgtggatctgccgcgacggtgaccgtgcgaaaaaccatctgctggaagcgaac
ttgcgtctggtggtgtcgctggccaagcgctacacgggccgcggcatggcgttcctggac
ctcatccaggaaggaaacctgggcctgatccgtgccgtcgagaagttcgactacaccaag
ggctacaaattctccacgtacgccacctggtggatccgccaggcgatcacccgcgcgatg
gccgaccaggcccgcaccatccgtattccggtgcacatggtcgaggtgatcaacaagctc
ggccgcatccagcgcgagctgctgcaggatctggggcgggagccgacgcccgaagagctg
gccaaagagatggacatcacgccggagaaggtgctggagatccagcaatatgcgcgtgag
ccgatctccctggaccagaccatcggtgatgaaggcgattcccagctcggtgatttcatc
gaggactccgaagctgtggtggccgtcgacgcggtgtcgttcacgctgctgcaggatcag
ctgcagtcggtgctggaaaccctgtcggagcgtgaagcaggcgtagtgcggctgcggttc
ggcctcaccgacggccagccgcgcacgctcgacgagatcggtcaggtgtacggggtgacg
cgcgaacgcatccgccagatcgaatcgaagacgatgtcgaagttgcgccaccccagccgt
tctcaggtgctgcgcgactacttggactga
DBGET
integrated database retrieval system
