Mycolicibacterium celeriflavum: MCEL_17150
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Entry
MCEL_17150 CDS
T08164
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mcee
Mycolicibacterium celeriflavum
Pathway
mcee03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mcee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MCEL_17150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcee03400
]
MCEL_17150
Enzymes [BR:
mcee01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MCEL_17150
DNA repair and recombination proteins [BR:
mcee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MCEL_17150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DUF4096
Motif
Other DBs
NCBI-ProteinID:
BBY43420
UniProt:
A0A1X0BV81
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All DBs
Position
1742967..1743923
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AA seq
318 aa
AA seq
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MTAMIRPMLATLGKPPTQFDSWALEAKYDGQRGMAVVDGGTVKLWSRSGAAFTRTFAEIA
TALSTGNRRLVLDGEIVALDEIGVPSFSRLQRRWPQNRRPTPDLLRQVPVRFYVFDVLEL
DGRDLTRKPYTMRRRELEDLADHYGCVVRVPANWTEPDPASVLESSAELGLEGIVCKHLD
STYTLGVRSRDWIKTCHRHRSSFVIGGWLPGTGVNRNTLGAVLVGAYTPAGQLRFCGVVS
AGLTEAARRRLTEAVKPLQRSACPFRDVPADFAPYAVWVHPQLVGDVEFREFRGSLRHPS
LKGLRVDMGDLEAVAIPT
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccatgattaggccgatgctggccaccctcggtaagccgcccacccagttcgac
agctgggcgctcgaggcgaaatacgacgggcagcgcggcatggccgtcgtcgatggcggc
acggtgaagctatggagccgcagcggcgccgccttcacacgaaccttcgcggagatcgcc
acggcactttccaccggcaaccgccgcctggttctcgacggagaaatcgtcgccctggac
gaaattggcgtcccgtcgttcagccgtttacaacgacgctggccccagaaccgccgccca
acccccgacctactacgccaggtcccggtccgcttctatgtgttcgacgtccttgaactc
gacggccgcgacctcacccgtaagccgtacacgatgcgacgccgcgaactcgaggatctg
gccgatcactatgggtgcgtcgttcgagtgcctgcgaactggacagagccggacccggca
tcggtcctcgaatcctcggccgaactcggactcgaaggcatcgtctgcaaacacctcgac
agcacctatacgctcggagtgcgatctagggactggattaagacgtgccatcgccacagg
agttccttcgtgatcggcggatggctgcccggaacgggcgtgaatcgcaacaccttgggt
gcggttctcgtcggcgcctacacgcccgcgggccagctgagattctgcggcgtggtgtcc
gccggtctcaccgaagcggcccgccggcgacttacagaagcggtaaagccgttgcaacgc
agcgcatgtcctttccgcgatgtgcccgcagacttcgccccgtacgccgtctgggttcat
ccgcagctagtcggcgacgtcgagttccgcgaattccggggatctcttcggcacccttca
ttgaaggggctcagagtagacatgggagacctcgaggcggttgccatccctacctaa
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