Mycolicibacterium celeriflavum: MCEL_45670
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Entry
MCEL_45670 CDS
T08164
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mcee
Mycolicibacterium celeriflavum
Pathway
mcee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCEL_45670 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcee03019
]
MCEL_45670 (deaD)
03009 Ribosome biogenesis [BR:
mcee03009
]
MCEL_45670 (deaD)
Enzymes [BR:
mcee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MCEL_45670 (deaD)
Messenger RNA biogenesis [BR:
mcee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MCEL_45670 (deaD)
Ribosome biogenesis [BR:
mcee03009
]
Prokaryotic type
rRNA helicases
MCEL_45670 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
UvrA_inter
P-loop_SecA
CMS1
HEM4
adh_short
Motif
Other DBs
NCBI-ProteinID:
BBY46272
UniProt:
A0A1X0BX51
LinkDB
All DBs
Position
4724579..4726255
Genome browser
AA seq
558 aa
AA seq
DB search
MTPSEPDATGTELTFDDLQIHPSVLRAVVDVGYETPSAIQAATIPAMMAGSDVVGLAQTG
TGKTAAFAIPILSKIDTGSRVTQALVLAPTRELALQVAEAFGRYGAHLPEVNVLPIYGGS
SYGPQLAGLKRGAQVVVGTPGRVIDHLEKGRLDLSRLDYLVLDEADEMLQMGFAEDVERI
LSDTPEYKQVALFSATMPPAIRKITTKYLHDPVEVTVKAKTATAENISQRYIQVAGHRKM
DALTRVLEVEEGDAMIVFVRTKQATEEVAERLKARGFAAAAINGDIPQAQRERTIAALKD
GSIDVLIATDVAARGLDVERISHVLNYDIPNDTESYVHRIGRTGRAGRSGAALLFVTPRE
RHLLRAIEKATRSKLIEAELPTVEDVNAQRVAKFRDSITEALNAPGTDVFRNIIEDYERE
HDVPIADIAAALAAQARGGDQFFMVEPPPEKRRERDDRPRRDKPDRKSRDGLVTYRIAVG
KRHKVGPGHIVGAIANEGGLHRSDFGHITIRPDFSLVELPADLPQKTLKALENTRISGVK
INLQPDRRPDKARRKQQR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacgccctccgagccggatgcgactggcaccgagctgacctttgatgacctgcaaatt
cacccgtcggtgctgcgggccgttgtcgacgtcggctacgagacgccctcggccatccag
gcggcgaccatcccggcgatgatggccggctccgacgtggtgggcctggcccagaccggc
accggcaagaccgcggcgttcgccatcccgattctgtccaagatcgacaccggcagtcgc
gtcacccaggcgctggtgttggcgcccactcgcgagttggcgctgcaggtggccgaggcg
ttcggtcgctacggcgcgcacctgcccgaggtcaacgtgttgccgatctacggcgggtcg
tcctacggcccgcagttggcgggactcaagcgcggtgcccaggtggtcgtcggaacgccg
ggccgggtgatcgatcacctcgagaagggccggctcgatctgtcgcggctcgactatctg
gtgctcgacgaggccgacgagatgctgcagatgggcttcgccgaagacgtcgagcgcatc
ctgtccgacacccccgagtacaagcaggttgcgttgttctcggcgaccatgccgcccgcg
atccgcaagatcaccaccaagtatctgcacgacccggtcgaagtcaccgtcaaggcgaaa
accgccaccgccgagaacatttcgcagcgctacatccaggttgcgggccaccgcaaaatg
gatgcgctgacgcgggtgctcgaggtcgaagagggcgacgcgatgatcgtcttcgtccgc
accaagcaggccaccgaagaggtcgccgaacggctcaaggccaggggtttcgccgctgcg
gcgatcaacggcgacatcccgcaggcgcagcgcgagcgcaccatcgccgcgttgaaggac
ggaagcatcgacgtcttgatcgccacggacgtcgccgcgcgcggcctggacgtcgagcgc
atctcccacgtgctgaactacgacatccccaacgacaccgagtcctacgtgcaccggatc
gggcgcaccggccgcgccggccggtccggggcggcgctgctgttcgtcacaccccgggaa
cgccacctgctcagggcgatcgagaaggccacccggtccaagctgatcgaggccgaactg
ccgacggtcgaagacgtcaacgcccagcgggtggccaagttccgcgactcgatcaccgag
gcgctcaacgccccggggaccgacgtgttccgaaacatcatcgaggactacgaacgcgag
cacgacgtgccgatcgccgacatcgccgcggcgctggccgcgcaggcgcgcggtggggac
cagttcttcatggtcgagccgccgccggagaagcgtcgcgagcgcgacgaccggccgcgc
cgcgacaagcccgaccgcaagtcgcgggacggcctggtcacctaccgcatcgcggtcggc
aagcggcacaaggtcgggccggggcacatcgtcggcgcgatcgccaacgaaggcggcctg
caccgcagcgacttcggccacatcaccatccggccggacttctcgctcgtcgagttgccc
gccgatctgccccaaaagacgctcaaagcccttgagaacactcgtatctcgggggtgaag
atcaacctgcagcccgaccggcggccggacaaggcccggcgcaagcagcagagatga
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