Microbulbifer celer: LPW13_01690
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Entry
LPW13_01690 CDS
T07789
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mcel
Microbulbifer celer
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcel03016
]
LPW13_01690 (rnd)
Enzymes [BR:
mcel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LPW13_01690 (rnd)
Transfer RNA biogenesis [BR:
mcel03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LPW13_01690 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
UFN57786
LinkDB
All DBs
Position
459651..460787
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AA seq
378 aa
AA seq
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MEQAKKLVDTTPIWVDSGKELARLCEQWQQQNAIALDTEFMRSRTFYPVPALVQVGDGKN
CYLIDNLAIADLSPLKALLLDTRVVKIMHSCSEDLETFDRLLGIVPDPIFDTQIAGALTG
LGHGLGYAATVSQLLQIELPKSETRSDWLQRPLSESQKNYAALDVAWLPLVYGLELKKLR
ERDRLAWLQEDCAAMVASARNPEPPELYYLRVKGAWRLRGNQVAVLQDLCAWREREARER
DMPRNHLLKENVCLSLAQSMPRYLATLAQPGLEGKTVRKYGETLLEIIARAAERTDVPPP
LPQPLNRSQGDQLKALRQAVNQWAEENNLPPEILVRKKELEALLQSSEPKLEGRLTGWRR
QIIGERLLAELANMRSTQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggctaaaaaactggtggataccacacccatctgggtcgatagcggcaaagag
ctggcccggctgtgtgaacagtggcagcaacagaatgccatagcgctggataccgagttt
atgcgcagccgcactttttatccggtgccggcgctggtgcaggtgggggatggcaaaaac
tgctacctgatcgataacctcgctatcgctgacctgtcgccactcaaggcgttactgctg
gatacccgcgtggtgaaaatcatgcactcctgcagcgaagacctggaaacctttgatcgt
ttgctcggtatcgtgccggatccgatttttgatacccagattgccggtgcacttaccggg
ctggggcacggtctgggttacgcggcaacggtcagtcaactactgcaaatcgagttgccc
aaaagcgagacgcgctctgactggttgcagcgcccgttgagtgagtcccagaaaaactat
gcggcgttggatgtagcctggctgccattggtttacgggttggaactgaaaaagctgcgt
gagcgcgaccgcctggcatggctgcaggaagattgcgcagccatggtggcgagcgcgcgc
aacccggagccaccggaactttattatctccgagtgaaaggtgcctggcgcctgcgaggg
aatcaggttgcagtgttgcaggacctctgtgcatggcgtgagcgggaagcgcgagaaaga
gacatgccgcgcaatcacctgctgaaagagaatgtctgcctgtcattggcccagtccatg
cccaggtatctggcgacactggcgcagccggggctggaaggaaaaaccgtgcgcaagtac
ggcgaaacactgctggaaattatcgcccgcgcagccgaacgcacagatgtgccaccgcca
ttgccgcaaccactgaatcgcagccagggggatcaactcaaggcgttgcgacaggcggtg
aatcagtgggcggaggagaataacttgcccccagagatcctggtgcgcaaaaaagagctt
gaggcgttgctgcaatcttccgagccaaaactggaagggcgccttacgggatggcggcga
cagattatcggcgagcgattactggccgagctggccaacatgagaagtacccaatga
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