Microbulbifer celer: LPW13_03385
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Entry
LPW13_03385 CDS
T07789
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
mcel
Microbulbifer celer
Pathway
mcel00020
Citrate cycle (TCA cycle)
mcel00190
Oxidative phosphorylation
mcel00650
Butanoate metabolism
mcel00720
Other carbon fixation pathways
mcel01100
Metabolic pathways
mcel01110
Biosynthesis of secondary metabolites
mcel01120
Microbial metabolism in diverse environments
mcel01200
Carbon metabolism
Module
mcel_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mcel_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mcel_M00149
Succinate dehydrogenase, prokaryotes
mcel_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LPW13_03385 (sdhA)
00650 Butanoate metabolism
LPW13_03385 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LPW13_03385 (sdhA)
00720 Other carbon fixation pathways
LPW13_03385 (sdhA)
Enzymes [BR:
mcel01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LPW13_03385 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
Thi4
DAO
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UFN58105
LinkDB
All DBs
Position
860671..862443
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AA seq
590 aa
AA seq
DB search
MSNMRTITFDGIVIGGGGAGMRAALQMAQSGFKTAVITKVFPTRSHTVSAQGGITCAIAS
DDPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEEGRIYQRP
FGGQSKDFGRGGQAARTCAAADRTGHALLHTLYQNNVKNNTVFLNEWFAVDLVKNQDGAV
VGVIAICIEDGEVVFIKSKATVLATGGAGRIFASTTNAHINTGDGVGMALRAGVPVQDME
MWQFHPTGIYGAGTLVTEGCRGEGGYLINKDGERFMERYAPNAKDLAGRDVVARSMVLEI
LDGRGAGPNGDHVFLKLDHLGEELLHSRLPGICELAKTFAHVDPVHTPIPVVPTCHYMMG
GIPTNVHGQALTQDASGNDQVIDGLYACGEVACVSVHGANRLGGNSLLDLVVFGRASGLF
IEQSLREGVENREASESDIESAMSRLNSLETTNNGEGAAKLRTELQNVMQNHFGVFRRGD
YMAEGVKKLEELRERIGNVRLDDKSRAFNTARIEALELQNLLEVAEATAIAAEVRTESRG
AHAREDFQERDDENWLCHSMFYPSEKRVGKRAVNFAPTTVDTFEPKTRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatatgcgaacaataacctttgacggtatcgtaattggcggtggcggcgcgggt
atgcgcgcggcactgcagatggcgcagtccggcttcaaaactgcggtaatcaccaaagta
ttcccgacccgctcgcacacggtttccgcccagggcggtatcacctgtgccattgccagt
gatgatcccaatgacgattggcgttggcacatgtacgacactgtgaaaggttccgactat
atcggtgaccaggacgccatcgagtatatgtgctctgtgggcccggaagcggtattcgag
ctggagcacatgggcttgcctttctcccgtacagaagaggggcgtatctatcagcgcccg
ttcggtggccagtccaaggacttcggccgcggcggccaggcggcacgcacctgtgcggca
gcagaccgtaccggtcacgctctgctgcacacgctgtaccagaacaacgtcaaaaacaac
accgtattcctgaacgagtggttcgcggtggacctggtgaagaaccaggacggcgctgtc
gtcggtgtcatcgctatctgcattgaagacggcgaagtggtgttcatcaaatccaaggcc
acggtactggccaccggcggtgccggccggatttttgcttccacgaccaacgcccatatc
aataccggtgacggtgtcggtatggccctgcgcgccggtgtgccggtgcaggatatggaa
atgtggcagttccaccccaccgggatttacggtgccgggactctggtcacagaagggtgt
cgcggtgaaggcggctacctgatcaataaagacggtgagcgcttcatggagcgctatgcc
cccaacgccaaagacctggccgggcgcgatgtggtcgcccgctccatggtactcgagatt
ctcgatggtcgcggtgccggtcccaatggcgaccacgtgttcctgaagctggatcatctg
ggcgaagagttgctgcacagccgcctgcccggtatctgtgagctggcgaagaccttcgcc
cacgtagacccggttcacaccccgattccggtggtgccgacctgtcactacatgatgggc
gggattcccaccaatgtgcacggccaggccctgacccaggatgcgtccggcaatgaccag
gtcatcgatggtctgtacgcctgcggtgaagtcgcctgtgtatcggtacacggtgccaac
cgcctgggcggcaattccctgctggacctggtggtattcggtcgcgcttccggtctgttt
atcgagcagtccctgcgtgaaggtgtcgagaatcgcgaagcgtccgagtccgatatcgag
tcggcgatgtcgcgtctgaacagcctggagaccaccaacaatggtgaaggtgcggcaaaa
ctgcgtaccgagctgcagaatgtgatgcagaatcacttcggtgtattccgtcgcggtgac
tacatggccgagggcgtgaagaagctggaagagctgcgcgagcgcattggtaatgtgcgc
ctggacgacaagtcccgcgccttcaatactgcgcgtatcgaggccctggaactgcagaac
ttgctggaagtggcggaagccactgcaatcgcggcagaagtgcgcaccgagagccgcggc
gctcatgcccgtgaggatttccaggagcgtgacgacgagaactggctgtgtcactccatg
ttctatccgagcgagaaacgtgtcggcaagcgtgcggtcaacttcgcccccacgactgtc
gataccttcgagccgaaaacgcgtacttattaa
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