Microbulbifer celer: LPW13_05525
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Entry
LPW13_05525 CDS
T07789
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mcel
Microbulbifer celer
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcel03021
]
LPW13_05525
Transcription machinery [BR:
mcel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LPW13_05525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UFN58504
LinkDB
All DBs
Position
complement(1358707..1359861)
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AA seq
384 aa
AA seq
DB search
MSRVNIHSRDDEWLKDTSNAIAGDDLTQEPPVQPTPTGRALFDDEPAASDEPIAENVSTP
MQNYLKHLYRLDLLTPEEEHTTTCMLRELEDKIIALLQKRGVELVELRSEGVEQRGSTGA
YDHGLIIAKAEALLAQGNISQRDRSSLLSLMRRFRANRKKLIQCNLRLVIAIAKRFRNPS
VPFIDLIQEGNVGLMKAIERFKPQMGYRFSTYAYWWIQQEIQLTLRRNDDIVRQPANVQD
DLRSIYRAINEVRSEGLPASDENIARETGLELERVQSLLKLPGPTGSLDDPISDDQNSTR
LDYAPANELFNTDELVSNQELAERLREAVSRLPPRQRTVLSLRYGLISDRDCSFRVIGEQ
LGLSQERARQLHSDALRQLKRQWR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
ttgtcccgagtcaatattcactcgagggatgatgaatggctgaaggatactagcaacgct
atcgccggggatgacctcacccaggaacccccggtgcaacccaccccgacgggccgcgca
cttttcgacgacgagcccgctgcgtctgacgaacccatcgcggagaacgtcagtacgccg
atgcagaactacctcaagcacctctaccgcctggatctcctgaccccggaggaagagcac
accaccacctgcatgctgcgggaactggaagacaagattatcgcgctgctgcaaaaacgt
ggcgtggagctggttgaactgcgcagcgagggggtagaacagcgcggcagtaccggcgcc
tacgatcacgggctgatcattgccaaagcggaagcattgctggcgcagggaaatatctcc
cagcgcgaccgcagcagcctgctcagcctgatgagacgcttccgcgcgaatcgcaaaaag
cttatccagtgtaatctgcgcctagtgatcgccatcgccaagcgcttccgcaatccatct
gttccctttatcgacctgatccaggaaggcaacgtcgggctgatgaaagcgatcgagcga
ttcaaaccacaaatgggctatcgcttttcgacttacgcctactggtggattcagcaggaa
atacagctgacgctgcggcgtaacgacgatatcgttcgtcagcccgccaatgtgcaggat
gacctgcgcagtatttaccgcgccatcaacgaagtgcgctcggaagggctccctgcttct
gacgagaatattgccagggaaaccggactggagctggagcgggtgcaaagcctgttgaaa
ttaccaggccccaccggctcactggacgacccgatctccgatgatcaaaacagcacccga
ctggattacgcaccggccaatgaactgttcaataccgatgagctggtatccaatcaggag
ctcgcagaacgcctgcgggaagcggtttccagactgccaccacgacagcgtaccgtgctg
agcctgcgctatgggctgatatcggatcgcgattgctccttcagggtaatcggcgaacaa
ctggggctcagccaggaacgcgcccggcaactgcactccgacgctttgcggcaactcaag
cggcaatggcgttaa
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