Microbulbifer celer: LPW13_08395
Help
Entry
LPW13_08395 CDS
T07789
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcel
Microbulbifer celer
Pathway
mcel03420
Nucleotide excision repair
mcel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPW13_08395
03430 Mismatch repair
LPW13_08395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcel03400
]
LPW13_08395
Enzymes [BR:
mcel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPW13_08395
DNA repair and recombination proteins [BR:
mcel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPW13_08395
MMR (mismatch excision repair)
Other MMR factors
LPW13_08395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
Herpes_ori_bp
DEAD
AAA_22
PLN_propep
Motif
Other DBs
NCBI-ProteinID:
UFN59040
LinkDB
All DBs
Position
2001054..2003345
Genome browser
AA seq
763 aa
AA seq
DB search
MSGSESTLTEEQQAIANHAGGHAKIIAVAGSGKTTALLHYIKNRLAAGTDPGRMLVVMYN
RSAREDFSKRLQQLCADADTGNPHAGLGVQTFHSLGYRLYQRMMRRGHIAQANLTPLPQS
LVQLQIWKAIEACAPPEELEDIRARKQSETEAAEFFIDYTKTILTGDLSAFEQLGLDDRY
MYFLKVFRQFERWRQEQSAVTYADLIYDPAMVFSMRPDIAESYGSFYEDILVDEYQDINE
IQHFLLRVIYGKSGNVIAIGDPDQTIYEWRGSRPAFLLRLFDGDFPPSNVYRLSQTFRYG
HTLSLAANHFIQNNRERADMLCVSGRREAETDIQQVATDNEGKWLVEQVRHCQREGHALS
EIAVLVRLWSLAAPLELALLANHVPYRSGSRNTVLSRRELRPLFWSLNIAAGRFAELPQQ
RRSKGLYEWLTAPHIRIARAVLEPLCDRLAEQKSGWGKAMMQLAPESLSKPQYKRLRQRA
ELLTQVEKWRGHGGELLRRQLSDLDYLSGIAEDAFNRQQGEERQQTILAFCQYLDGLRMP
PKETLEHLQQLQEQHQQQEKTSDNTPSDAIQITTMHQAKGLEWDQVIIPSLTDQNMPYQP
QRDFSTPASTESERRLMYVAMTRARKRLYLLTPKTTAERPGSQPEKRLPVEAQNEQKPSL
FLDEMHIPLCRLLGDALIEKPGDITTQVPVTRLAMRYMSACDYNPEINAPRATQRRPAIG
DSVRHQKLGYGRVTKWEDERVEILFSDRKSRRFDWEKLSQFLI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagcgagtccacccttacggaagaacaacaggcgattgccaaccatgccggt
ggacatgccaagatcattgccgtcgccggctccggcaagaccaccgcgctactgcactac
attaaaaaccggttggcggcgggaacagatcccggccggatgctggtagtgatgtacaac
cgcagtgcgcgcgaagacttcagcaagcgcctgcagcaactgtgcgcagatgccgacacc
ggcaatccgcacgcggggctcggcgtgcagacatttcacagcctcgggtaccgcctttac
cagcgcatgatgcgccgcggtcatattgcacaggccaatcttactcccctgccgcagtcc
ctggtccagttacagatctggaaagcgatcgaggcttgtgcaccaccggaagaacttgaa
gatatccgtgcacgcaaacaatcggaaacagaagccgctgaattttttatcgactatacc
aaaaccattctcaccggagatctcagcgcgtttgagcaactcggcctcgacgatcgctat
atgtatttccttaaagtgttccgccagttcgagcgctggcgtcaggaacagagtgcggtt
acctacgcagacctgatttacgatccggcaatggtgttcagtatgcgcccggatatcgcc
gaatcctacggtagcttctatgaagatatcctggtcgatgaataccaggacatcaatgag
atccagcactttctattgcgagtgatttatgggaaatccggcaacgttatcgccattggc
gatcccgatcagaccatttacgagtggcggggctcgcggccggcttttttgctgcgacta
tttgacggcgacttcccgccgtccaatgtctatcgcctgagccaaactttccgctacgga
cacaccctgtcattggccgcaaaccacttcatccagaacaaccgcgagcgcgcagacatg
ctgtgtgtttccggcaggcgtgaggcggaaaccgatattcagcaagtggccaccgacaac
gaaggaaagtggctggttgaacaggtgcgccactgccagcgcgaggggcatgcactatca
gaaattgccgtgctggtacgcctctggtcactggccgcaccgctggaactggcactgctg
gccaaccatgttccttaccgctctggcagccgcaacacggtactctcaagacgagagttg
cgaccgctgttctggagcctgaatatagccgccggacgcttcgcggaactaccacaacag
cgtcgcagcaagggactgtatgaatggcttacggcaccgcatatccggattgcccgcgca
gtccttgagccgttgtgcgacaggctggcagaacaaaagagcggctggggtaaggcaatg
atgcaactggccccggaatccctgagcaagccccagtacaaacgtttacgacagcgggcg
gaattgctgacgcaggtggaaaaatggcgcggtcatggcggcgagctattgcgacgacag
ctgagcgacctggactatctgagcggcattgccgaagacgccttcaatcgccagcaagga
gaagaacggcagcagaccattctcgccttctgccagtatctggatgggctgagaatgccg
ccgaaggaaaccctggagcatctacagcaattacaggaacaacaccagcaacaggaaaag
accagcgacaacactccctccgatgcaatccagataaccaccatgcatcaggccaaggga
ctggaatgggatcaggtcataatcccctccctcaccgaccagaatatgccgtatcaaccc
cagcgggatttctctaccccggcctccaccgaaagcgagcgccgcctgatgtatgtggcc
atgacccgggcacgcaagcgcctgtacctgctcactccgaaaaccaccgcggagcgcccc
ggatcacaaccagagaagcgccttcccgtagaggctcaaaatgaacagaagccctcgctg
tttctggacgagatgcacattcccctgtgccgcctgctgggcgatgccctgattgagaaa
ccgggggacatcaccacgcaggtaccggtcacccggctggcaatgcgctatatgagcgcg
tgtgattacaaccccgaaatcaatgcaccacgggctacccagcgacggccagccatcggc
gacagtgtgcggcaccagaaactgggatacgggcgggttaccaagtgggaggatgagcgg
gtggaaattctgttcagcgaccgcaaaagccgtcgcttcgattgggagaagctatctcag
ttcctgatataa
DBGET
integrated database retrieval system
