Microbulbifer celer: LPW13_08505
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Entry
LPW13_08505 CDS
T07789
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
mcel
Microbulbifer celer
Pathway
mcel00071
Fatty acid degradation
mcel00280
Valine, leucine and isoleucine degradation
mcel00310
Lysine degradation
mcel00362
Benzoate degradation
mcel00380
Tryptophan metabolism
mcel00410
beta-Alanine metabolism
mcel00640
Propanoate metabolism
mcel00650
Butanoate metabolism
mcel00907
Pinene, camphor and geraniol degradation
mcel00930
Caprolactam degradation
mcel01100
Metabolic pathways
mcel01110
Biosynthesis of secondary metabolites
mcel01120
Microbial metabolism in diverse environments
mcel01200
Carbon metabolism
mcel01212
Fatty acid metabolism
Module
mcel_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LPW13_08505 (fadB)
00650 Butanoate metabolism
LPW13_08505 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LPW13_08505 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LPW13_08505 (fadB)
00310 Lysine degradation
LPW13_08505 (fadB)
00380 Tryptophan metabolism
LPW13_08505 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LPW13_08505 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LPW13_08505 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LPW13_08505 (fadB)
00930 Caprolactam degradation
LPW13_08505 (fadB)
Enzymes [BR:
mcel01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LPW13_08505 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LPW13_08505 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LPW13_08505 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LPW13_08505 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
UFN59061
LinkDB
All DBs
Position
complement(2028837..2030993)
Genome browser
AA seq
718 aa
AA seq
DB search
MVFSGKALSVQMLEDGIAELNFDLQGESVNKFNRQTVSEFSEALDAIEKSGDIKGLLLSS
SKDVFIVGADITEFGDAFSAGEEGIAALMNKNNENINRLEDLPFPTVVAINGYALGGGFE
VCLGCDYRVMGDKAKVGLPEVKLGLIPGWGGTVRLPRVVGVDVAAEWIAAGKEQRADAAL
TAHAVDAVIPTDQLKDAALKLLGRAIAGELDYKARREIKKSPIPLNDTEALMAFFTTKAF
VGQQAGRNYPSPVNAVTSIEQGYKVGRDEALKIEQQQFIASAQTDTAKSLVGLFLNDQKI
GKVAKGWEKKADKKIERAAVLGAGIMGGGIAYQSAYKGTPIKMKDINQDGIDLGLNEANK
LLAKLVERGRMDAKKMGQVLNRIEPTLSYDGFDDVDVVVEAVVENPKVKHAVLTEVEGKV
SDDTVIASNTSTISIDTLAEPLKRPENFLGMHFFNPVHKMPLVEVIRGEKTSDNAVARVV
AYANKMGKKAIVVRDCPGFLVNRVLFPYFAGFSMLVRDGADFQQVDKVMERWGWPMGPAY
LMDVVGIDTGVHAEKVMAEGFPERMGKSFTAASDVMYEAERYGQKNGKGFYNYEEDKKGR
PKKVATDESYELLKPHVAERREFEQDEIIERMMVPMATELARCLEEGIVDSPAEADMALI
YGIGFPPFRGGIFAWLDKIGLDNFVKMAEKHADLGELYKPTEGMREMAAKGATYYGDK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggtatttagtggcaaagcactttctgtgcagatgctggaagacggcatcgcggaactg
aactttgatctgcaaggcgaatcggtcaacaagttcaaccgtcagaccgtttcagaattc
tccgaggcgctggacgccatcgaaaagtccggcgatatcaagggtcttctgctcagcagt
agtaaagacgtctttattgtcggtgcggatatcaccgagtttggcgacgcgttctctgcc
ggcgaagaaggcatcgccgcgctgatgaacaagaacaatgagaatatcaatcgcctggaa
gatctgccgtttccgacagtggtagccatcaacggttatgcactgggcggtggcttcgag
gtctgtctcgggtgtgattaccgcgtaatgggcgataaagccaaagtcggcctgccagaa
gtgaaactgggtctgattcccggttggggcggtaccgtgcgactgccacgcgtggttggc
gtagatgtcgcagcagagtggattgccgccggtaaagagcagcgtgctgatgcggctctg
actgcccatgcggtagatgcggtcattcctaccgaccagctgaaagatgcagcactgaag
ctcctgggccgcgcgattgccggagagttggattacaaagcgcgtcgcgagatcaagaaa
tccccgatccccctgaacgataccgaagcgctgatggcgttcttcactaccaaggcgttt
gtggggcagcaggccggtcgcaattacccctctcccgtcaacgcggtgacctctatcgag
cagggctataaggttggtcgtgatgaggctctgaaaatcgagcagcagcaatttattgcc
agcgcgcagaccgacaccgccaaatccctggtgggtctgttcctgaacgaccagaagatt
ggcaaggttgccaagggctgggagaaaaaggctgacaaaaagatcgagcgcgcagcggtg
ctgggtgccggcattatgggtggtggtattgcttaccagtccgcttataaaggcacgccg
atcaagatgaaagacatcaaccaggacggtatcgacctaggcctgaatgaagccaacaag
ctgctggccaaactggtcgaacgcggacgtatggacgcgaagaaaatggggcaggtgctg
aatcgcatcgaaccgaccctcagctatgacggctttgacgatgtggatgttgtggttgaa
gcggtcgtcgaaaaccccaaggtcaagcatgctgtgctgaccgaggttgagggcaaggta
agcgacgacaccgttatcgcgtccaatacctccaccatttccatcgataccctggcggag
ccgctgaagcgtccggaaaacttcctcggcatgcactttttcaacccggtgcacaaaatg
ccactggtggaagtgatccgcggcgagaaaacctccgacaacgcggtggcccgtgttgtg
gcctacgccaacaaaatgggtaaaaaggccatcgtggtacgggattgccccgggttcctg
gtgaaccgcgtgttgttcccttatttcgccggcttctccatgctggtgcgcgatggcgct
gacttccagcaggttgacaaggtcatggagcgctggggttggcccatgggtcccgcctac
ctgatggacgtggtcggcatcgataccggtgtgcacgccgagaaggtgatggcagaaggt
ttcccggagcgtatggggaaatccttcactgcagcctccgatgtgatgtatgaagccgag
cgttatggccagaagaatggcaagggcttctacaactacgaagaagacaagaagggtcgc
ccgaagaaggtggcaaccgatgagtcctacgagctgctcaagccgcacgtggcggagcgc
cgggaattcgagcaggacgaaattatcgagcgcatgatggtgcctatggcgaccgagttg
gcccgttgcctggaagagggcattgtggactctcctgcagaagccgatatggcgctgatt
tacggtatcggtttcccgccgttccgcggcggcatcttcgcctggctcgacaagatcggc
ctggataacttcgtgaaaatggcagagaagcacgccgatctgggcgagctgtacaagcct
accgaaggcatgcgtgaaatggcggccaaaggcgccacctactacggcgacaagtaa
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