Microbulbifer celer: LPW13_09725
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Entry
LPW13_09725 CDS
T07789
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mcel
Microbulbifer celer
Pathway
mcel03030
DNA replication
mcel03430
Mismatch repair
mcel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPW13_09725 (dnaE)
03430 Mismatch repair
LPW13_09725 (dnaE)
03440 Homologous recombination
LPW13_09725 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcel03032
]
LPW13_09725 (dnaE)
03400 DNA repair and recombination proteins [BR:
mcel03400
]
LPW13_09725 (dnaE)
Enzymes [BR:
mcel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPW13_09725 (dnaE)
DNA replication proteins [BR:
mcel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPW13_09725 (dnaE)
DNA repair and recombination proteins [BR:
mcel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPW13_09725 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
UFN55859
LinkDB
All DBs
Position
complement(2321078..2324596)
Genome browser
AA seq
1172 aa
AA seq
DB search
MTQPFVHLRIHSEYSLIDGLVRIKPLINRVAELEMPAVAVTDQTNFYAQVKFYKACMGAG
IKPITAADFWLKEGGEDQPTLLTLYAMNGDGYRNITELISRAWMEGQYHGHAYIEREWLK
EYASGVLMLSGAKYGDVGRALIAGRTAQAEALAQEWESVFPGRYYLELQRTSRPGDEEYL
HAAVDLAGRLNLPVVATNDVRFLEDSEFEAHEVRVCIREGRALDDPRRERRYSPEQYLRT
PEEMQALFKDIPEALENTVEIARRCSSPIQLGKYFLPQFPIPEGMTENEFFEKISFDGLY
ERLETILDKSAPDYEARKKEYEDRLRFELDIVIQMGFPGYFLIVMDFIQWAKDHDIPVGP
GRGSGAGSLIAYSQKITDLDPLQYDLLFERFLNPERVSMPDFDVDFCMEKRDQVINYVAD
HYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPPDPGMTLEKAFEQEEV
LREFLENDEEGQEIWEMALQLEGVARNVGKHAGGVVIAPTKLTDFAPLYCDETGAGLVTQ
FDKNDVEDAGLVKFDFLGLRTLTIIDWAKAMVDEQRAREGKEPLVIEALPLDDPDTYAMI
KRAETTAVFQLESRGMKDLIKRLRPDNLEDMIALVALFRPGPLQSGMVDDFINRKHGRAQ
VAYPDAKYQHEKLKPILEPTYGVIVYQEQVMQIAQELAGYTLGGADMLRRAMGKKKPEEM
AKQRATFEQGAKEQGVDPDLAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPA
QFMAATMSSDMDKTDKVVTFIEECRAMGLDLVPPDVNLGSYQFSVDVDNRIIYGLGAIKG
LGEGPIDNIIAEREQGGPFTDLFDFCSRIDPRKVNKRALEALVRSGALDSIGPDTTGEDG
LDYSRAVLFNALDEAVKSAEQQSKNDSAGMMDLFGEVVRSASDGDVYEDFRGARPWGIRE
RLEGEKNTLGLYLTGHPIDEYEDELKHLVKARIADLKPGRESQKVAGLCVGMRVMKTKRG
DSMAIVTLDDRSARIEAAVFSEAFGEHREKLVKDSLLVLEGAISHDDYSGGLKMSVNSVS
TLDDLRSGSVIGVTLSIDSAQALPNTGQRLSACLRPYIGGGCPVRVEVERSDARGTFLLA
DDWKVDPNDQLIQSLREVIGRERVKLNYTQRQ
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacccttcgtacatttgagaatccattccgaatactccctgatcgatggcctg
gtgcggatcaagccgttgatcaaccgggttgccgagctggaaatgccggcggtggcggta
accgatcagaccaatttttacgcccaggtgaaattttataaggcctgtatgggcgcaggg
atcaagccgattactgcggcagatttctggctgaaagaggggggggaggaccagccgacc
ctacttacgctctacgccatgaacggcgatggctatcgcaatattaccgagctgatctcc
cgcgcgtggatggaggggcagtaccacgggcacgcctacatcgagcgggaatggctgaaa
gaatatgccagcggtgtactgatgctgtctggtgccaaatatggcgacgtgggccgggct
ttaattgccgggcgcaccgcacaggcggaagcgttggcgcaggagtgggagagcgttttc
cccggccgttactacctggaattacagcgtaccagccgtcctggcgatgaggagtacctg
cacgcggcggtggatcttgcgggcaggctgaatctgccggtagtggctaccaacgatgtg
cgttttctggaagacagtgagtttgaagcccacgaggtacgggtttgtatccgtgagggc
cgcgccctggacgatccccgccgtgaacggcgctattccccggagcagtatctgcgaact
ccggaggaaatgcaggcgctgttcaaagacattccggaagcactggaaaatacggtggaa
attgcccgccgctgttcctcgccgatccaactgggcaaatacttcctgccccagttcccg
atccctgagggaatgacggagaacgagttcttcgagaaaatctctttcgacggcctttac
gagcggctcgaaaccatcctcgacaagtccgcgccggattacgaagcgcgcaagaaggaa
tacgaagaccgcttgcgctttgagctggatatcgtgatccagatgggattccctggctac
ttcctgatcgtgatggactttatccagtgggccaaggatcacgatataccggtagggccg
ggacggggttccggtgccggctcgttgattgcctattcgcagaaaattaccgatctggac
ccgctgcagtacgatctgctgttcgagcgcttcctgaacccggagcgggtatccatgccc
gacttcgacgtcgacttctgcatggaaaagcgcgaccaggtgatcaactacgtggccgat
cactacggccgtaatgccgtgagccagatcatcaccttcggcaccatggccgccaaggcg
gtggtgcgggacgtggcacgggtgcagggcaagtcttacggccttgcagacaaactctcg
aagatgattccgccggacccgggcatgaccctggagaaggctttcgagcaggaggaggtg
ctgcgggagttcctggagaacgatgaggagggccaggaaatctgggagatggcgctgcag
ctggaaggtgtggcccggaacgtcggcaagcacgccggtggtgtggtcatcgcacccacc
aagctaacggattttgccccgctgtactgtgacgagaccggtgccggcctggttacccag
tttgacaaaaacgacgtggaagatgcgggtctggtgaagttcgacttcctcggcctgcgc
accctgaccatcatcgactgggccaaggcgatggtggacgagcagcgcgcgcgggaaggc
aaagagccgctggtgatcgaggcgctgccgctggatgatcccgatacctacgcgatgatc
aagcgcgccgaaaccaccgcggtgttccagctcgaatcccgcggtatgaaggacctgatc
aaacgcctgcggccggataaccttgaggacatgatcgccctggtggccctgttccgcccg
gggcccttgcaatcgggcatggtagacgactttatcaaccggaagcacggccgcgcgcag
gtggcctacccggatgccaagtaccagcacgaaaagcttaaaccgattctcgagcccacc
tacggggttattgtctaccaggaacaggtgatgcagatcgcccaggagctcgcgggttat
accctgggtggtgcggacatgctgcgccgggccatgggtaagaaaaagcccgaggaaatg
gccaaacagcgggcgacctttgaacagggcgcgaaggaacagggcgtagatccggacctg
gcgatcaaaatcttcgatctggtggagaaattcgccggctacggcttcaacaaatcccac
tccgcggcctacgccctggtgtcataccagactgcatggctgaaggcccattacccggcg
cagtttatggctgccaccatgtcttcggacatggacaagaccgacaaggtggtgaccttt
atcgaagagtgccgggccatggggttggacctggtgccgccggatgtgaatctgggcagc
taccagttttcggtggatgtggacaaccgtattatttatggtctgggtgcgatcaagggg
cttggggaaggtccgatcgacaatattatcgccgagcgcgagcagggcgggccgtttacc
gatctgttcgatttctgctcccgtatcgatccacgcaaggtcaacaaacgcgcgctggag
gcactggtacgctctggcgcccttgacagtatcgggccagataccactggcgaagacggt
ctggactattctcgcgcggtgctgttcaacgccctggacgaggcggtaaagtccgccgag
cagcagagcaaaaacgatagtgccggcatgatggacctgtttggtgaggtcgtgcgttcc
gcctctgacggtgatgtgtatgaggacttccgcggtgcgcgcccctggggcatccgcgag
cggttggagggggagaaaaataccctcggtctgtacctcaccggccaccccatcgatgag
tatgaagatgagctcaagcatctggtgaaggcgcgtattgccgacctgaagccgggccgg
gagagccagaaggtggctggtctctgtgtggggatgcgggtgatgaagaccaagcgcggt
gactccatggcgattgtcacgctggatgaccgcagtgcacgtatcgaggcggcggtgttc
agcgaggcatttggtgagcaccgggaaaagctggtgaaggactcactgctggtgttggag
ggggcgatctcccacgacgattacagcggcggcctgaagatgagcgtcaacagtgtgtcg
acactggatgacctgcgcagtggcagtgtgattggcgtgacgctgagcatcgacagcgcc
caggcgttgccgaataccgggcagcgcctgagcgcgtgtctgcgcccctatattggcggg
ggctgtccggtgcgggtggaagtggagcgcagcgacgcgcgcggtaccttcctgctggcg
gatgactggaaagtggatcccaacgaccagctgatccagtctttacgcgaagtgatcggc
cgggagcgggtgaagctcaactacactcaacggcaataa
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