Microbulbifer celer: LPW13_15295
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Entry
LPW13_15295 CDS
T07789
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
mcel
Microbulbifer celer
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcel03000
]
LPW13_15295 (rtcR)
Transcription factors [BR:
mcel03000
]
Prokaryotic type
Other transcription factors
Others
LPW13_15295 (rtcR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA_2
AAA
AAA_19
NACHT
AAA_22
AAA_16
AAA_30
ATPase_2
MCM
NTPase_1
IstB_IS21
AAA_14
AAA_18
ABC_tran
AAA_7
nSTAND3
ResIII
T2SSE
TsaE
TniB
AAA_29
cobW
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UFN56917
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All DBs
Position
3683757..3685367
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AA seq
536 aa
AA seq
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MKTVAISILGTTMDRRGKGDKRWDKWRPTVSMFQHDDLLIDRLELLFDNHSQGLAKQVTE
DIARVSPETEVVHHRVNFADPWDFETVYSQLLDFARGYSFKPTRESYLVHITTGTHVAQI
CLYLLTEAGYLPGQLLQTAPAKRDSNLPGQYQIIDLDLSRYDQIASRFQKEHQEGTVYLK
GGIETNNAAFNRMIEQLEKVSIRSNAPILITGPTGAGKTQLAQRVYELRRQRGKLEGRLV
AINCATLKGENTMSALFGHKKGAFTGATADRAGLLKEAHKGLLFLDEIGELGLDEQAMLL
RAIEDKRFIPFGSDRETSSDFQLIAGTNKDLAQKAREGAFRADLLARIDLWTYELPSLKE
RIEDLEPNLDYEIESFSNKAGHLVSFNKAAREKYLAFGRSPEASWSANFRDLNASITRMG
TLADGGRITVEVVNEEISRLKRKWQTAEDSGENPKAAIENVLGAGSSEEMDYYDQLKLAA
LIEVCRESGSMAEAGRKLFDVSRQAKKSNNDSHRVKQLLGKYGIRFEDLKAECREV
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagtagccatcagtattctcggcaccaccatggatcggcgcggcaagggcgac
aagcgctgggacaagtggcggccgaccgtttccatgttccagcacgacgatctgctgatc
gatcggctggagctgttgttcgacaaccactcccagggcctggccaagcaggtaacggag
gatatcgcccgcgtatcgccggagacggaggtggtgcatcaccgggtgaacttcgccgat
ccgtgggatttcgagacggtgtacagccagctgctggatttcgcgcgcggctactcattc
aagccgacccgggaaagttacctggtccatatcacgaccggcacgcacgtcgcgcagatc
tgtctctacctgctcaccgaggcgggctaccttccggggcaactgctgcagacggccccg
gccaaacgcgacagcaacctgcccgggcagtaccagatcatcgacctggatctctccaga
tacgaccagatcgcctcgcgcttccagaaggagcatcaggaaggcaccgtctatctgaaa
ggcggcatcgagaccaacaacgccgctttcaaccggatgatcgagcagctggaaaaggtt
tccatccgctccaacgcgcccattctgattaccggccccaccggcgcgggcaagacacag
ttggcccagcgggtgtacgaattgcgcaggcagcgcggcaaactcgaggggcggttggtg
gcgatcaactgcgccacgctcaagggggagaacaccatgtctgcgttgttcggccacaag
aagggtgcctttaccggcgccaccgccgatcgcgccgggcttttgaaggaggcccacaag
ggcctgctgttcttggatgagatcggtgagctggggctggatgaacaggcgatgctgttg
cgcgcgattgaggacaaacgctttattccgttcggctccgacagggagaccagcagcgat
ttccagttgattgccggtaccaataaggatcttgcgcagaaagccagggagggagccttc
cgcgcggacctgctggcccggatagatctgtggacctacgagctgccgtcgctcaaggag
cggatcgaggacctggaacccaatctcgattacgagattgagtccttctccaataaggcg
gggcacctggtgagcttcaacaaggccgcgcgggaaaaatacctcgccttcggccgatca
cccgaagccagctggtctgccaatttccgcgatctcaatgccagtattacccgtatgggg
accctcgccgatggggggcgcattaccgtcgaggtggtcaatgaggagatcagccgcttg
aagcgcaaatggcagacggcagaggacagcggagaaaaccctaaagccgcaatcgagaat
gttttgggagccggcagcagtgaggagatggattactacgatcaactgaagctggccgcc
ttgatcgaggtgtgtagagagtccggctcgatggcggaggccggcaggaagctgtttgac
gtgagccggcaggcgaagaaatcgaataacgattcccaccgggtcaagcagttgctaggc
aagtatggaatcagattcgaggatctgaaagccgagtgccgtgaggtctag
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