Microbulbifer celer: LPW13_15435
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Entry
LPW13_15435 CDS
T07789
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mcel
Microbulbifer celer
Pathway
mcel03030
DNA replication
mcel03410
Base excision repair
mcel03420
Nucleotide excision repair
mcel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPW13_15435 (polA)
03410 Base excision repair
LPW13_15435 (polA)
03420 Nucleotide excision repair
LPW13_15435 (polA)
03440 Homologous recombination
LPW13_15435 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcel03032
]
LPW13_15435 (polA)
03400 DNA repair and recombination proteins [BR:
mcel03400
]
LPW13_15435 (polA)
Enzymes [BR:
mcel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPW13_15435 (polA)
DNA replication proteins [BR:
mcel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LPW13_15435 (polA)
DNA repair and recombination proteins [BR:
mcel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LPW13_15435 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPW13_15435 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
UFN56940
LinkDB
All DBs
Position
complement(3714566..3717307)
Genome browser
AA seq
913 aa
AA seq
DB search
MSNDNSNSAPLILVDGSSYLYRAFHALPPLATSTGQPTGAVRGVISMLRKHLKEHPHSPV
VVVFDAKGKTFRDELFEDYKSHRPPMPDDLRAQIQPIHDIIDAMGLPRLVIDGVEADDVI
GTLALQAADKGMEVIISTGDKDMAQLVRPGVTLVNTMSNTELDVDGVKEKFGVGPELIID
FLALMGDKSDNIPGVPGVGEKTALALLQGLGSLKNIYANLDAIAPLGFRGSKTLAKKMAE
HKEAADMSYLLATIKTDVDMEQKPESLANGEPDSDRLRELFSALEFRSWVDELGGSEEGS
AAEALSVERNYSIITEEKDLDAWLEKLAAADIFAFDTETTSLNYMQAKLVGVSFAVEAGE
AAYLPLAHDYMGAPEQVDFDRALVKLKKILEDDKIKKVGQNLKYDSHILANYDIELRGIK
RDTMLESYVLNSTASRHDMDSLAQKYLGESTVKFEDIAGKGAKQLTFNQIELDKAGPYAA
EDADITLRLHRELSSRLAKEGELAKVLDEIEMPLLPVLVHIERNGTYIDAAMLKKQSGEL
EEKMRDLEQQAFEEAGEEFNLGSTKQLGAILFEKLEIPVIKKTPKGAPSTAEPVLQELAL
SHKLPALIMQYRGMAKLKNTYTDKLPQMIDPATGRIHTSYHQAVAATGRLSSSDPNLQNI
PIRSEEGRRIRQAFIADPRINGGSLIVAADYSQIELRIMAHLSGDRGLLDAFARGEDIHR
ATASEVFEVALDEVSDEQRRRAKAINFGLIYGMSAFGLAKQLGIPRADAQTYIDRYFERY
PGVLEYMENTRKAAADRGYVETLFGRRLYLPEINSRNGMQRQAAERTAINAPMQGTAADI
IKRAMIAVDRWLREETLKSRLIMQVHDELVLEVPADERDRIVKKVPELMQAAADLDVPLI
ADLGEGANWDEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgacaattcgaattcagcgccgctaatcctcgtggacggctcttcctacctg
taccgcgcgtttcacgcgctgccgcccctggcgaccagcaccggccagcccaccggtgcc
gtgcgcggtgtgatttccatgctgcgcaaacacctgaaagagcatccgcacagcccggta
gtggtagtttttgatgccaaggggaaaaccttccgcgacgagctgtttgaagactacaag
tctcaccgtccgccgatgccggacgacctgcgcgcacagattcagccgatccacgacatc
atcgatgccatgggcctgccgcgcctggtgatcgacggcgtggaagcggacgatgtgatc
ggcaccctggcgctacaggccgcggacaaagggatggaagtgatcatttccaccggcgac
aaggacatggcgcagctggtacgcccgggggtgacgctggtgaacaccatgtccaacact
gagctggatgtggatggggtgaaggaaaagttcggcgtcggcccggagctgatcatcgac
ttcctcgcgctgatgggcgacaagtccgacaatattcccggagtgcccggcgtgggtgag
aaaaccgcgctggccctgttgcaggggctcggcagcctgaaaaacatctacgccaacctg
gatgcgatcgcgccgctgggtttccgtggctccaagacattggccaagaagatggccgaa
cacaaagaggcggcggacatgtcatacctgctcgccaccatcaagaccgatgtggacatg
gagcagaagccagaatccctggccaatggcgagccggacagcgacaggctacgcgagctg
ttcagcgcgctggaattccgcagctgggtggacgaactcggtggcagtgaggagggttcc
gcggcggaagcgctgtcggtcgagcgcaactacagcatcatcaccgaagaaaaagacctg
gacgcgtggctggagaagctggcggcggccgatatctttgcgtttgataccgaaaccacc
agcctcaactatatgcaggccaagctggttggggtgagcttcgcggtggaagccggtgag
gccgcctacctgccgctcgcccacgactatatgggcgcaccggaacaggtggatttcgat
cgcgcgctggtcaaactgaaaaaaatccttgaagacgacaagatcaaaaaggtcggccag
aacctcaagtacgacagccacatcctggccaattacgatatcgaactgcgcggtatcaag
cgcgacaccatgctcgaatcctatgtgttgaacagcaccgccagccgtcacgatatggac
agcctcgcacagaaatacctgggcgaatccacggtcaagttcgaggatattgccggcaag
ggcgccaagcagctcaccttcaatcagattgaactggacaaggcgggcccctacgcggcg
gaagatgcggacatcaccctgcgcctgcaccgggagctgagtagccgcctggccaaagag
ggcgagctggcgaaggtgctggatgaaatcgagatgccgctgttgccggtgctggtgcat
atcgaacgcaacggtacctacattgatgcggcgatgctgaaaaagcagtccggcgagctg
gaagaaaagatgcgcgacctcgaacagcaggcgttcgaggaagcgggggaggagttcaat
ctcggctccaccaagcagctcggcgccatcctgttcgaaaagctggaaattccagtgatc
aagaaaacccccaagggggcaccgtccactgccgagccggtactgcaggaactggcgctg
tcccacaagctgccggcgctgatcatgcaatatcgcggtatggcgaagctgaaaaacacc
tacaccgacaagctgccgcagatgatcgatccagccaccggccgtatacacacctcctac
caccaggcggtggcggccaccggccgtctgtcttccagcgatccgaacctgcagaacatt
cctatccgcagcgaagagggccgtcgcatccgccaggcgtttatcgccgatccgcgcatc
aacggcggcagcctgatcgtggctgcggactattcccagatcgagctgcgcatcatggcg
cacctgtctggcgacaggggcctgctggacgcgtttgcccgcggtgaggatattcaccgc
gcaaccgcctcggaagttttcgaggttgccctggacgaggtcagtgatgaacagcgccgc
cgcgccaaggcgatcaatttcggtctgatctacggcatgagcgccttcggcctggcgaaa
cagctgggcattccgcgcgcagatgcgcagacctatatcgatcgttacttcgagcgctat
cccggggtgctggaatatatggagaatacccgcaaagcggcggcggatagaggctatgtg
gaaaccctgttcggccgccgcctgtacctgccggaaatcaactcccgcaacggcatgcag
cgccaggccgcggagcgcaccgcgatcaacgccccgatgcagggcaccgcggcggatatt
atcaagcgcgcgatgatcgccgtggatcgctggttgcgggaggagacactgaaaagccgc
ctgatcatgcaggtacacgatgaactggtgctggaagtgcccgccgacgagcgcgacagg
atcgtgaaaaaagtaccggaactgatgcaggccgcggcggacctcgatgtgccattgatc
gcggacctcggagagggtgccaactgggatgaggcccactga
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