Microbulbifer celer: LPW13_15720
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Entry
LPW13_15720 CDS
T07789
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mcel
Microbulbifer celer
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcel03032
]
LPW13_15720 (gyrB)
03400 DNA repair and recombination proteins [BR:
mcel03400
]
LPW13_15720 (gyrB)
Enzymes [BR:
mcel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LPW13_15720 (gyrB)
DNA replication proteins [BR:
mcel03032
]
Prokaryotic type
DNA Topoisomerases
LPW13_15720 (gyrB)
DNA repair and recombination proteins [BR:
mcel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LPW13_15720 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
TOPRIM_C
Motif
Other DBs
NCBI-ProteinID:
UFN56994
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Position
complement(3775997..3778417)
Genome browser
AA seq
806 aa
AA seq
DB search
MSQENNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCDE
IRVIIHPDESISVSDNGRGIPTEIHSEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV
GVSVVNALSEELKLTIRRGGKIHEQVYRHGVPEAPLAVVGDSETSGTTVHFKPSPETFTN
IQFHYDQLAKRLRELSFLNSGVRIVLKDERSGKEEVYEYEGGLRAFVEFLNQNKTPINKV
LHFKNQREDGIAVEVALQWNDSFQENIFCYTNNIPQRDGGTHLAGFRAALTRGLNSYIEK
EGVGKKDKVSTTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKPAVEQEMGHSFTD
YLLENPQEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQQKDPALSE
IYLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIG
KSEFDPDKLRYHSIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHVFIAQPPLYKISK
GKQEQYLKDEASLTQYLTNAALESATLYVNPEAPGLAGNALESLVKEYRAVMATIDRLNR
LYPEQVLHSMVYLPSVSPEDLQSEEKMQTWSVRLQELLEQEADGGGRRHLVSIRKDEERD
LYLPAINIVAHGVSSDYVISHEFFESAEYRAICTLGEKMLDLLEEGAYIQRGEKRQSVTS
FPEALTWLMNESRRGYNIQRYKGLGEMNPEQLWETTMNPETRRMLQVTVEDAIAADQIFT
TLMGDNVEPRREFIESNALAVENLDV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagaaaataattacgattccagtagcatcaaggttctcaagggcctggatgcg
gtgcgcaagcgcccgggaatgtacattggtgacacggacgatggaaccggcctgcaccat
atggtgtttgaagtggtggacaactccatcgatgaggcgctggcaggacattgcgacgaa
atcagagtcatcatccaccctgacgagtccatcagtgtctcggacaacggccgcggcatt
cccacggagattcactcggaggagggcgtttccgcggcggaagttattatgacggtcctc
cacgccggtggtaagttcgatgacaacacctacaaggtgtccggtggcctgcacggggtg
ggggtttccgtagtaaacgcgttgtcggaagagctgaaactcaccatccgccgtgggggt
aagatccatgaacaggtctatcggcacggcgtgcccgaggccccactggctgtcgtcggt
gacagtgaaacctccggaaccacggtacatttcaaaccgtccccggagacttttaccaat
atccagttccattacgaccaactggccaagcgtctgcgagagctgtcgttcctgaactcc
ggtgtgcgcatcgtgctgaaggatgagcgctcgggcaaagaggaagtctacgaatatgag
ggtggcctgcgtgccttcgtggagttcctgaaccagaacaagacaccgatcaacaaagtg
ctgcacttcaagaaccagcgtgaagatggcatcgcggtagaggtggcactgcaatggaac
gattccttccaggaaaatattttctgttacaccaacaatattccccagcgtgacggcggt
acccacctggcgggcttccgcgcagccctgacccgtggtctcaatagctatatcgaaaaa
gaaggggtagggaaaaaggataaggtcagcactacgggcgatgacgcccgcgaaggcctg
acagcgatcatttcggtcaaagtaccggacccaaagttctcctcccagaccaaagacaag
ctggtctcctccgaggtaaaaccggcggtcgagcaggagatgggacactcgttcaccgac
tacctactggaaaacccgcaggaagccaaggcggtagtgggcaagatgattgatgctgcc
agagctcgggaggcggctcgtaaggcgcgggagatgacccgccgcaagggcgcactggat
atcgccgggcttcccggcaagctggcagactgccaacagaaagacccggcgctgtcagaa
atctacctggtggagggcgattccgctggaggctcggcaaaacaggggcgcgaccgccgc
acccaggccatcctgcccctcaaggggaagatcctgaatgtggaaaaggcccggttcgac
aagatgctgtccagcgccgaagtgggcaccctgattaccgctctgggttgcggtatcggc
aagagtgagtttgatcccgacaaactgcgctaccacagcatcattatcatgacggatgcc
gacgtggatggcgcgcacatccgtaccctgttgctcaccttcttcttccgtcagatgccg
gaactgattgaacgcggtcatgtatttattgcgcagccaccgctgtacaagatatccaag
ggcaagcaggagcagtacctgaaagatgaggcgtctctgacccagtacctcaccaacgcc
gccctcgagagcgcgaccctctacgtcaatccggaagctccggggctggcaggcaatgcg
ttggaatccctggtcaaggaataccgcgccgtgatggcgaccatcgatcgcctcaatcgc
ctttacccggagcaggtcctgcactccatggtctatttgccgagcgtgagcccggaagac
ctgcagagtgaggaaaaaatgcagacctggagcgttcgcctgcaagagctgctggagcag
gaagccgacggcggcggccgccgccacctggtgagcattcgcaaagatgaagaacgggat
ctctatctgccggcgatcaatatcgtggcccacggcgtgagtagtgactatgtgatcagt
cacgagttcttcgagtccgcagagtatcgcgccatctgcaccctgggtgaaaagatgctg
gatctgctggaagagggcgcctacatccagcgcggtgaaaagcggcagtccgtcaccagc
ttccccgaagcactgacctggctgatgaacgagagtcgccgcggctacaacatccagcgc
tataaaggtctgggagaaatgaacccggagcagctgtgggagaccaccatgaatcctgag
acccgtcgcatgctgcaggtaacggtggaagacgccattgccgcggaccagatcttcacc
accctgatgggggacaatgtggagccccggcgtgaatttatcgaaagcaacgcgctggcg
gtggaaaacctggatgtgtga
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