Microbulbifer celer: LPW13_16065
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Entry
LPW13_16065 CDS
T07789
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcel
Microbulbifer celer
Pathway
mcel03420
Nucleotide excision repair
mcel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPW13_16065 (uvrD)
03430 Mismatch repair
LPW13_16065 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcel03400
]
LPW13_16065 (uvrD)
Enzymes [BR:
mcel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPW13_16065 (uvrD)
DNA repair and recombination proteins [BR:
mcel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPW13_16065 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LPW13_16065 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
UFN57060
LinkDB
All DBs
Position
3865129..3867357
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AA seq
742 aa
AA seq
DB search
MDVSELLDPLNDAQREAVAAPPGNQLVLAGAGSGKTRVLVHRIAWLMQVEGASPYSIMAV
TFTNKAAREMRGRIEELLGVNTFGMWVGTFHGLAHRLLRAHWQEAKLPQNFQILDSDDQL
RLIKRVQNEIGLDEKKWPPRETQWWIGAQKDEGIRPQYIQLTGDPWLQTMVGIYTAYEAA
CQRAGVVDFGELLLRAHELLRDNDGILAHYRRRFPFILVDEFQDTNTIQYAWLRLLAGDE
CRITAVGDDDQSIYGWRGAKIENIQHFEADLRDVQTVRLEQNYRSTSTILNAANAVIAHN
TGRLGKELWTEGDKGEPISLYSAYNEQDEARFIVQRIQDWVREGNRRDSVAILYRSNAQS
RVLEEGLLREQVPYRIYGGQRFYERLEIKNALSYMRLITNRHDDTSFERVVNTPTRGIGA
RTVDLVREFAREHGSSMWDAAARMLQQKVLAARAGNALANFLNLIDTLDEESTDKTLEHI
AELVVEQSGLIEFHGKEKGEKGQTRVENLQELVSACRSFDGVPTADADGEAVDEEEIPLI
NQFLDSAALDAGEGQADEFEDAVQLMTLHSAKGLEFPLVFMAGVEENLFPHKMSAQEPGR
MEEERRLCYVGITRAMQKLYITYAESRRLFGSETFNKPSRFVSEIPVEYVHEVRLKSEIS
KPLFQPNYGKLGGGINPYSDAAPEFDDDLPPLALGGRVEHAKFGEGTVTQFEGNGPRARV
QVNFDDVGSKWLVVSMAKLQPL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcagaactcttagaccccctcaacgacgcccagcgcgaggccgtagccgcg
cccccgggcaaccaactggttctcgccggtgccggctcgggcaagacccgggtgctggtg
caccgtatcgcctggctgatgcaggtggagggggcctccccctactccattatggcagtg
accttcaccaacaaggccgcgcgcgagatgcgcggccggattgaagagctgctgggggtg
aacactttcggcatgtgggtgggcaccttccacggcctcgcccaccgcctgttgcgcgcc
cactggcaagaggccaagctgccgcagaacttccaaatcctcgattccgacgaccagctg
cgcctgatcaaaagggtgcagaacgagatcgggctggacgagaagaagtggccgccgcgg
gagacccagtggtggattggcgcgcagaaagacgagggcatccgcccgcagtatatccag
ctcaccggcgacccctggctgcagaccatggtgggtatttacactgcctacgaggccgcc
tgtcagcgcgcgggggtggtggatttcggcgagttgctgctgcgcgcgcatgagctgttg
cgtgataacgacggcatcctcgcccactatcgccgccgcttcccgttcatccttgtggac
gaattccaggacaccaacactattcaatacgcctggctgcgcctgctggcgggggatgag
tgccggatcactgcggtaggcgatgacgaccagtcgatttacggctggcgcggggccaag
atcgagaatatccagcacttcgaggcggacctgcgagacgtgcagaccgtgcgtctggag
cagaattaccgctccaccagcaccatcctcaatgccgccaacgcggtgatcgcccacaac
accgggcgtcttggtaaagagttgtggaccgagggtgacaagggtgagccgatctcgctg
tattccgcctacaacgaacaggatgaggcgcggtttatcgtgcagcggatccaggattgg
gtgcgcgaaggcaaccgccgcgacagcgtcgcgatcctgtaccgctccaatgcgcagtcg
cgggtgctggaagaggggctgttgcgggaacaggtaccctaccgtatctatggtggtcag
cgcttctacgagcgcctggagatcaagaatgcgctgtcctatatgcgcctgatcaccaat
cgtcacgacgacacctccttcgagcgcgtggtcaatacccccacccgcggtatcggcgcg
cgcaccgtggacctggtgcgggaattcgcccgcgagcacggcagttccatgtgggacgcc
gccgccaggatgctgcagcagaaagtgctcgccgcccgcgccggcaatgcgttggccaac
ttcctcaacctgatcgacaccctggacgaagagagcaccgacaagaccctcgagcatatc
gccgagctggtggtggagcagtccggcctgatcgaattccacggcaaggaaaaaggcgag
aaaggccagacccgggtggagaacctgcaggaactggtgagcgcctgccgctccttcgac
ggcgtacccaccgcagatgccgatggcgaagcggtggacgaggaagagatcccgctgatc
aaccagttcctcgacagcgccgcgctggatgccggcgaaggtcaggcagacgagtttgag
gatgcggtgcagttgatgaccctgcactccgccaaaggcctcgagttcccactggtgttc
atggccggagtggaggaaaacctgttcccgcacaaaatgtcggcgcaggaaccgggccgc
atggaagaggaacgtcgcctctgttacgtgggtattacccgcgcaatgcagaaactgtat
atcacctatgcggaaagccgccgcctgttcggcagcgagaccttcaacaagccgtcgcgc
tttgtaagtgaaatcccggtggaatacgtgcacgaagtgcgcctgaagagcgaaatttcc
aagccgctgttccagcccaactatggaaagctgggaggaggcatcaacccctactccgac
gcagcgcccgaattcgatgatgacctgccaccgctggccctgggcggccgtgtggagcac
gccaagttcggcgaaggcaccgtcacccagttcgaaggcaacggcccgcgcgcgcgggta
caggtcaactttgacgatgtgggcagcaagtggctggtagtatccatggccaagttgcag
cccctataa
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