Microbulbifer celer: LPW13_17525
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Entry
LPW13_17525 CDS
T07789
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mcel
Microbulbifer celer
Pathway
mcel00040
Pentose and glucuronate interconversions
mcel01100
Metabolic pathways
mcel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LPW13_17525
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LPW13_17525
Enzymes [BR:
mcel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LPW13_17525
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
UFN57345
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Position
4203020..4204624
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AA seq
534 aa
AA seq
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MRYRILPGVTAIAVSFLLTACGGGGGSGEIIPPVNGGSSSSSSSSSGGSSSSSSSSSGGS
SSSSSSGGMGDVSVACEKLATDPTVNWRDSAELDTDQKIVECLSKTLGNAVGYGEDATGG
YDAAGNSKLVVIEKNQSVSVEQQIYNAVSSDDYNWIVFDKEDFAQETEVSMHRVYCGRSE
VQSAIGGTEQQCVNYQDWCSANGVEAGEACVAEFFNTQLNQDGLPIGNTDIGSNTTLDGR
GSGAYFRFNGFEIRGVENVILTHLDFRGAGHIEDHELDPDMIRSDASHDIWIHKNSFELT
GDSAFDVKQGASGITMSFNRLLDVKRASLHGSSDDRTVNKNITTTMHHNAFITTDDNFSA
FSGTARRVPLIRRGKTHMFNNVFLNYRKDVFSARVGAQVLWENNALMVNSEHGVALGTLR
NDLARDNYSSDDADNQSNFRTEGTFVWHSDSACNLNSDASMEIVSTWGEVGNLPADYSQA
SQDSISAELVDAGQPLVDYLIMTAGKGGEAPFNSPLANSQDYVVDLKESSDSCQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcgatacagaatcttgcccggtgttaccgcaattgcggtgtcttttctgttgaccgcc
tgcggtggcggcggtggctctggtgaaatcattccgcccgtcaatggcggcagctcttcc
agtagtagttcctcgtccggtggcagctccagttccagtagttcttcatccggcggaagt
tccagctcttcgtcttccggggggatgggggatgtttccgtggcttgcgaaaaactggcg
acagacccgacggtcaactggcgtgactctgctgagctggatactgaccaaaaaattgtc
gagtgtctgtcgaaaaccctcggtaatgccgtaggctatggtgaggacgcaactggcggc
tacgacgccgcgggcaacagcaaactggtcgtgattgaaaagaaccagagtgtttcagtt
gagcagcagatttacaacgcagtcagtagtgacgattacaactggattgtgttcgacaaa
gaggactttgcgcaggagaccgaggtttccatgcaccgcgtatactgtgggcgcagtgag
gtacagagtgcgattggtggaaccgaacagcagtgtgtgaactaccaggactggtgctcc
gccaacggggttgaagccggtgaagcctgtgtagcggagttcttcaatacacaattgaac
caggatgggctgcctattggaaacaccgatatcggttccaataccacactggatggtcga
ggttcaggtgcctattttcgctttaatggtttcgaaatcaggggtgtcgagaacgtgatt
ctcactcaccttgatttccgtggcgccggtcatatcgaagatcacgaactggatccagat
atgattcgcagtgatgcctctcacgatatctggattcacaaaaacagctttgagcttacc
ggtgactcggcatttgatgttaagcagggtgcgtccggcatcaccatgtccttcaaccgc
ctgcttgatgtaaagcgtgcgagtcttcacggttccagtgacgatcgcacggtgaataaa
aatattaccaccaccatgcatcacaatgcgtttattaccaccgatgataacttcagcgca
ttcagcggtacggcccgccgggtgccgcttatccgtcgcggtaaaacccatatgttcaac
aatgtattcctgaactaccgtaaggatgttttcagtgcccgcgtgggtgcgcaggtactt
tgggaaaataatgcactgatggtaaacagcgagcatggagtggcgctgggcacccttcgc
aatgatctggcccgggataactattccagtgatgatgcagataatcagagcaatttccgt
acggaaggcacttttgtatggcactcggacagtgcctgcaacctgaacagtgacgcatca
atggagatcgtgagtacctggggagaggtgggaaatctgcctgcggattattcccaggcg
tcacaagacagtatcagcgctgagttggtggatgccggtcaaccgctggtcgattatctc
atcatgactgctggtaagggcggcgaagcacccttcaattcgccgctggcaaatagccag
gattatgttgtggatcttaaggaatcatctgactcctgtcagtaa
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