Microbulbifer celer: LPW13_17920
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Entry
LPW13_17920 CDS
T07789
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mcel
Microbulbifer celer
Brite
KEGG Orthology (KO) [BR:
mcel00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcel01002
]
LPW13_17920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mcel01011
]
LPW13_17920
Peptidases and inhibitors [BR:
mcel01002
]
Cysteine peptidases
Family C82
LPW13_17920
Peptidoglycan biosynthesis and degradation proteins [BR:
mcel01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LPW13_17920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UFN57420
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Position
complement(4295120..4297081)
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AA seq
653 aa
AA seq
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MSYFIPERHKRKSPLPMLILGSLCLFALYYAFMANQKTVPVLPENAVRPHLVNWLEENPD
AWPAQDPIFNPAAVRRIYRRTDYRLLWFDNYSLSDTANDLLKQLTASSSGNPSSLVDYRY
HLGYFDRTLRDTPQRLQMAAVLDVLLTDAFISYAQDTQLDKLNPDSRKYHPRPRRKDITP
VNTTEGGFQMASTRFYARAEDSGRKYFRGYNRGSEKRDGRSVDRSTYYTQRGQSQRRSRP
TTYSGSTRYGTSHSARYSTRSYPRTYGSSMPRYRNLSDGPTAMPPASGEGIWLEENTPFG
GDAQALRQQLARYRDMAATGRWRPLPAGPAMTIGAKHPHVAILRNMLAVYGDYYSYGNDP
NSNKFDQRLHDAVVRFQVRHGLKPDGIVGRQTRQRLNLSPTARAHIIETNIRRREKLPAN
LGDNFIQVNVPGYKLNYVRNNRIKLSMNVVVGKKIHQTPEMTTRVSRVVFNPTWTVPRSI
LVNEILPKARSNPHGMENMGYRVVNGSGEYLPLTPSNLRTAASGGFLMRQKGGEKNILGR
IKFEIPNKDDIYLHDTRAKSLFSLTDRDYSHGCVRLAKPRQLAEALLRDEPGDWSRFRID
QLTTGDDTTEVRMKNQNVKVYITYWTAWVDGEGRMHFRPDIYGKDGLAVNQFD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatttcattccagagcgtcacaaacgcaagtcgccattgcccatgctgatactg
ggcagtctctgtctgtttgccctgtattacgctttcatggctaaccagaagaccgttccg
gtgcttccggaaaatgccgttcgcccccatctggtcaactggctggaggagaacccggac
gcctggccggcacaggacccgatcttcaatccggcggccgtgcgtcggatctaccgccgc
accgactaccgcctgttgtggtttgacaactacagtctcagcgacaccgccaacgacctg
ctcaagcagctcactgcatccagctcgggcaatcccagcagcctggtggattatcgctat
cacctgggctatttcgaccgcaccctgcgcgatacaccgcaacggctgcaaatggccgct
gttctggacgtgctgcttaccgatgcatttatttcctacgcccaggacacccagctggac
aagctgaacccggacagccgcaagtaccatccccgcccccgccgcaaggacatcaccccg
gtaaataccaccgagggcggtttccagatggccagcacccgattctatgcgcgcgcggag
gacagcggccgcaaatacttccgcggttacaatcgtggtagcgaaaaacgcgacggccgt
tccgtagaccgctccacttactacacccagcgcgggcagtcccagcgccgctcgcgtcca
actacctattccggtagcacccgatacggtaccagccactctgctcgctactcgacgcgc
agctatccgcgcacatacggctcctcgatgccgcgctatcgcaatttgtccgacgggccg
accgcaatgccgcccgccagtggcgagggcatttggctcgaggaaaacacaccctttggc
ggcgacgcccaagccctgcgccagcagctggcccgctaccgcgatatggccgctaccggt
cgctggcgcccgctaccggcgggaccggccatgaccatcggtgccaagcacccccacgtg
gccatcctgcgcaatatgctcgcggtatacggtgactactacagctacggcaatgatccc
aacagcaacaagttcgaccagcggttacacgatgccgtggtccggttccaggtgcgtcac
ggcctcaaaccggatggcattgtcggccgccagacccgccagcgcctgaacctgtcgccc
accgcccgcgcccatattatcgagaccaatatccgtcgccgggagaagctgcccgccaac
ctgggggacaacttcatccaggtaaacgtgcccgggtacaaactcaattatgtgcgcaat
aaccgcatcaagctgtccatgaacgtggtggtgggcaagaagatccaccagacaccggag
atgaccacgcgggtgtcccgtgtggtcttcaaccccacgtggaccgtaccccgcagcatt
ctggtgaacgagatcctgcccaaggcgcgctccaatccgcacggcatggaaaatatgggc
taccgggtggtgaatggcagcggcgaatatctgcccctgaccccgagtaacctgcgcacc
gcggccagtggcggcttcctgatgcgccagaaaggcggtgagaagaatattctcggccgc
atcaagttcgagatccccaacaaggatgatatttatctccacgacacccgcgccaagagt
ctgttctcgcttactgaccgcgactacagccacggctgtgtacgcctggccaagccccgc
cagctggcagaagccctgctgcgggacgagcctggcgactggagccgattccgcatcgac
cagctgaccaccggcgacgacaccacagaagtgcgcatgaaaaatcagaacgtcaaggtc
tacatcacctactggaccgcctgggtcgacggcgaagggcgcatgcacttccgcccggat
atctatggcaaagacggactggcggtcaatcagttcgactga
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