Mugil cephalus (flathead mullet): 124995574
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Entry
124995574 CDS
T08342
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124995574 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
124995574 (smarcd3b)
03036 Chromosome and associated proteins [BR:
mcep03036
]
124995574 (smarcd3b)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124995574 (smarcd3b)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124995574 (smarcd3b)
PBAF complex
124995574 (smarcd3b)
GBAF(ncBAF) complex
124995574 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
124995574
NCBI-ProteinID:
XP_047423998
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All DBs
Position
18:9996032..10038367
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AA seq
516 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PTPVMEPSRKRPAPSQQVQPQQQQQQQQQQQAAQNRARKKPVGFPGANEMPARQMDMREP
QSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALK
RPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFKS
LVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDP
RLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQ
RLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIAS
LDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRA
AFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcccggcatgccgtctggagcgaggatgccccaccaggga
gctcccatgggcccccccggcccgccctacggaggcagcccggcggtgcggcccggcctg
cccaccccggtgatggagcccagccgtaagaggcccgccccctcccagcaggtccagccg
cagcagcagcagcagcaacagcagcagcagcaggcggcccagaaccgcgccaggaagaag
cccgttggattcccgggagccaatgagatgccggcgaggcagatggacatgagagagccc
caatcagatcccacgctcggatcaaatgctaagagaaggaaaatggcagacaagattctt
ccgcaaaggatccgtgagctggtcccagagtcccaggcctacatggatctgctggcgttc
gagcgcaaactggaccagaccatcatgcgtaaacgagtggacatccaagaagcactgaag
agaccaatgaagcagcagaaacgtaagctgaggctttacatctccaacaccttcaaccca
gccaggcctgacgctgacgactctgacggcagcattgcatcatgggagctgagagtcgag
gggaagttgctggacgatccgggaaagcagaagaagaagttctcatcgttttttaagagc
ctggtgatcgagttggacaaagacctgtacggtcctgacaaccacctggtcgagtggcac
cgcacgcccaccacccaggagaccgacggcttccaggtgaagcggccgggagacgtgagc
gtgcgctgcactctgctgctcatgctggactaccagcctccccagtttaagctggaccct
cgcctggcacgtctgctcgggattcacactcagactcgctcgtgcatcatccaggctttg
tggcagtatgtgaagaccaacaagctgcaggactcccatgacaaggagtacatcaactgt
gacaagtacttccaacagatttttgactgccctcggctgaagttctctgagatccctcag
cgcctcaccaacttgctcctgccccctgaccccatcgtcattaaccacgtcatcagcgtg
gaccccaacgaccagaagaagacggcctgctacgacatcgacgtggaggtggaagacccc
ctgaagagccagatgagcagcttcctcctctccaccgctaaccagcaggaaattgcctcg
ctcgacaacaagatccatgagaccattgagtccatcaaccagctgaagatccagagagac
ttcatgctcagtttctccagagatccgaagggctacatccaggactggctcaaatcccag
agccgagaccttaagttaatgacagatgtagtaggcaaccccgaagaggagaggagggcg
gcgttctaccacgaaccctggtctcaagaggccgtcagccgctatttctactgcaagatc
cagcagaggaggcaggagctggaacaggccttggcggtccgcaacacctaa
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