Mugil cephalus (flathead mullet): 124995778
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Entry
124995778 CDS
T08342
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04140
Autophagy - animal
mcep04148
Efferocytosis
mcep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124995778 (vps41)
04148 Efferocytosis
124995778 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124995778 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
124995778 (vps41)
Membrane trafficking [BR:
mcep04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
124995778 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
TPR_7
zf_RING_Vps8_fungal
Beta-prop_RIG_2nd
Beta-prop_HPS5
Vps39_1
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
zf_RING_Vps8
TPR_19
TPR_PEP5_VPS11
TPR_17
Beta-prop_IFT140_2nd
zf-RING_UBOX
zf-rbx1
TPR_GEMI5
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
124995778
NCBI-ProteinID:
XP_047424403
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All DBs
Position
18:complement(9625258..9643532)
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AA seq
860 aa
AA seq
DB search
MSEMEEQGRKSSEECTDESEEEDSEEEPKLKYERLTNGVTEILQNDAASCMTVHDKFLAL
GTHFGKVFLLDIQGNVTQKFEISSVKINQISLDESGEHVGICSEDGKVQVFGLYTREGFH
DNFDCPIKVVALHPQFTRSNYKQFVTGGNKLLLYERNWLNRWKTSLLHEGEGTITNIQWR
ANLIAWANNVGVKIYDISTKQRITNVLRDNISLRPDMYPCSLCWKDNTTLIVGWGTSIKI
CVVKERNPTEMRDLPSRYVEIASAFETEFFISGLAPLADQLVALFFVKENSDQMDEEFRA
RPRLDIIQPLLETCEEISSDALTVRNFQDNECRDYRLEHSEGEPLFYIISPKDIVVAKER
DQDDHIDWLMEKKKYEEALMAAEISFKNIKRHEVQKIGMAYINHLVEKGDYDTAARKCQK
VLGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLKTDYEGFATLI
REWPGELYNNMAIVQAVNDHLKRDPTNSTLLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHRHNLFSSIEDKIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELADRPELLHVYLHK
LFKRDHHKGQKYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVFLL
SRMGNCRRALQMIMEELGDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLQKMHRTQM
RGVRVDEENICESCHATVLPSDMAKPFSVVVFHCRHMFHKECLPSAGTVSDNSVIPGVQF
CNICSAKRRGPGSGILEMKK
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagatggaggagcagggaagaaaatcaagtgaggaatgcaccgatgagtctgag
gaggaggacagcgaggaggagcccaagctgaagtacgagaggctcaccaatggagtgaca
gaaatcctccagaacgacgcagccagctgcatgaccgtccatgacaagtttctcgcccta
ggtacacattttgggaaggttttcctgttggacatccaaggaaatgtaactcagaagttt
gaaattagctcagtgaagatcaaccagatcagtctggatgaaagtggagagcatgtgggc
atctgctccgaggatgggaaggtgcaagtgttcggcctctacacaagagagggcttccat
gacaacttcgactgtcccatcaaagtggttgcattacaccctcagttcaccagatcaaac
tacaagcagtttgtcaccgggggcaacaagctccttctgtatgaaagaaactggctgaat
cgctggaagacttcgctcctgcatgaaggcgagggcacgatcactaatatccagtggagg
gccaacctgattgcgtgggccaacaatgtgggagtcaaaatctatgacatcagcacaaaa
cagcggatcaccaatgtattgagggataacatcagtctgaggccagacatgtacccgtgc
agcctctgctggaaagacaacaccactctcattgttggctggggcacctccattaagatt
tgcgtcgtgaaggagcgaaatccaactgaaatgagagatctgccaagtcgctatgtggaa
atagcttctgcatttgagaccgagttcttcatcagtggtctggcaccgctggcagatcag
ctggtcgccctcttcttcgtgaaggaaaactctgaccaaatggacgaggagtttcgtgcg
cgtcctcgtctcgacatcatccaacctctcctggagacctgcgaggaaatctcctcggac
gcgctgacggtgcgcaacttccaagacaacgagtgcagagactaccggctcgagcattcg
gagggagagccgctcttctacatcatcagtcccaaagacatcgttgtggccaaggagcga
gaccaggacgaccatattgattggctgatggaaaagaagaaatatgaggaggcactgatg
gccgcggagatcagcttcaaaaacattaagaggcacgaagtccagaagattgggatggct
tacatcaatcacttggtggagaagggagactatgacactgctgcaaggaagtgtcaaaaa
gttcttgggaaaaacatggaactgtgggagaatgaagtttacaggttcaagaccatcgga
cagctgaaggccatcagtcagtatctaccaagaggagatctacgtctcaggccggccatc
tatgaaatgatcctacatgaatttctaaaaactgactatgagggtttcgccacactgatc
cgagagtggccgggggagctttataataacatggccattgttcaggctgtcaatgatcac
ctgaagagggatcccaccaacagcacactgctcaccaccctggctgagctgtacacgtac
gaccagcggtacgacagagccttggagatctacctgagattgaggcacaaagatgtctac
cagctcatccacagacacaaccttttctcctccatagaggacaagatcgtactcctcatg
gactttgacaaagagaaagccgttgacatgcttctggacaatgaagacaagatatcgacg
gaccgggtggtggaggagctggcagacagacctgagcttctgcatgtgtacctccataaa
ctgttcaagagggaccaccacaaaggacaaaagtaccacgagaggcagataggcctctac
gccgaatacgaccgaccaaaccttttacctttcctgagagacagcacacactgccctctt
gaaaaggctctggagatctgtcagcagaggaacttcgtggaggagaccgtcttcctgctc
agcaggatggggaactgcagaagagccctgcagatgatcatggaggagctgggcgacgtg
gacaaggccatagagttcgccaaagagcaggacgacgcagagctgtgggaggatctcatc
tcctactctatcgacaaaccaccgttcatcactggactcctcaataatatcggcactcac
gtggatcccattctcctcatccaccgcataaaggaaggcatggagatcccgaaccttagg
gattcactggtgaagatcctccaggactacaatctacagattcttttgagggaaggatgc
aaaaagatcctggtggcagactccctctctctgctccagaaaatgcatcgaacccagatg
agaggagttcgggtcgatgaggagaacatctgtgagtcatgccatgctacagtattaccc
tcagacatggccaaacccttcagtgtggtggtgtttcactgcagacacatgtttcacaag
gagtgtttaccatctgcgggaacagtaagtgacaactctgtgatcccaggagtgcagttc
tgtaacatctgcagtgcgaagagacgaggcccaggaagtggaatccttgagatgaaaaag
taa
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