Mugil cephalus (flathead mullet): 124996050
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Entry
124996050 CDS
T08342
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcep04040
]
124996050 (trpc1)
Ion channels [BR:
mcep04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124996050 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
124996050
NCBI-ProteinID:
XP_047424823
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Position
18:8138739..8153429
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AA seq
795 aa
AA seq
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MHISVCPCSLSVVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNINCVDVLGRDAVTIAIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHINKRGLME
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEDKKNIMGPPLGM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKIVAHSKFKG
QEVERKNWEAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFL
GLFLLVLFSFTIGLTQLYGKDRKDPDKNRPADCEGIFCQQQSNDAFHTFMGTCYALFWYI
FSLAHVALFVTRISYTEELRSFVGALIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHEDK
EWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYFVTSMRKWICSHTSKGKVKRQNSLK
EWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRDL
LGFRTSKYAMFYPRS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtttgtccgtgctcactctccgtcgtaatggcagctctgtaccagggc
acggacgcctcctctccggacaaatttctggccttgaaagacgtgagagaagtgaaagag
gaaacgactctggacgagaagctcttcttgctggcatgcgagaaaggcgactactacatg
gtgaagaagctgctcgaggagaaccgacacggcgagctcaacatcaactgcgtggacgtg
ctgggccgagacgccgtgaccatcgccatcgagaacgagaacctcgacatcctgcagctt
ctcctggagcacggctgccaggcgaccgatgccttgttggtggccatcgactcggaggtg
gtgggagctgtggacatccttctcaaccaccggccgagacggtcttccaagccctctatc
gctaaactgatgcagcggatccagaacccggagtattccaccaccatggacgtggctcca
gtcatcctggcggctcaccggaacaactacgagatcctcaccatgctgctgaagcaggac
atctctctccctcggcctcacgccgtcggctgcgagtgcacgctctgcaacgctaaaaac
aagaaggacagcttgcgacactccagattccgtcttgacatctaccgctgcctggccagc
ccctctctcatcatgctgacagaagaagatcccatactcagggccttcgagctgagcacc
gacctgaaggagctcagcctggttgaggtggagttcaggaacgactatgaggaactggcg
aagcagtgcaagatgtttgccaaggacctgctggctcaggctcggaactcccgggagctt
gaagttattctcaaccacacgtccagcgaggatcacattaacaagaggggcttaatggag
gagcgcatgaacctcagccggcttaaactggccataaagtacaaccaaaaagagtttgta
gctcagtccaactgtcagcagttcctcaacaccgtctggttcggagagacggccagctac
cggcgcaagcacacttgcctaaagatggcaaccgtcctgagcgtggccatgctttggccg
ctgctttccgtctgctaccttctggtgccgcgctcccgagtgggccagataatccacacg
ccttttgttaagttcatcatccacagcgcctcctacttcaccttcctgctgctgctcaac
ctgtactctctggtctacaacgaggacaagaagaacataatgggccctccgcttgggatg
attgattacctgctcatcctctggatcataggaatggtgtggtcggacgtgaagcgcctg
tggtacgaggggctggaagactttctggaagagtcgaggaaccagctgagtttcgtgatg
aattccctctaccttgccacctttgccctcaagattgtggctcatagcaagttcaaagga
caagaagtggagaggaagaactgggaggccttccatcccatcctggtcgccgaaggcttg
tttgcctttgccaacgttttgagttacctgcgactcttcttcatgtacaccaccagctcc
atattggggccactacagatctcaatgggccagatgctgcaggagtttggaaagtttctg
ggcctcttcctgctcgtgttgttctccttcaccattggtctcacccagctgtacggaaag
gaccggaaagaccctgacaagaatcgaccagcggactgtgagggcatcttctgccagcag
cagagcaacgatgcattccacacgtttatggggacctgctatgcccttttctggtacatc
ttctccctcgcccacgtcgcgctcttcgtcacccgcatcagctacacggaggagctgcgc
tcttttgtgggcgccttgatcataggcacctacaacatcgtggtggtgatcgtgctgacc
aagctgctggtggccatgctccataagagtttcagacaaatcgctaatcacgaggacaag
gagtggaagtttgcccgggccaaactttggcttagctactttgacgacaagtgtactctg
cctccacctttcaatatcctcccatctccaaagactgtgtgctactttgtgaccagcatg
agaaaatggatctgttcacatacgtctaaggggaaagtgaagagacagaatagccttaag
gagtggaagaacctgaagcagaagcgcgatgagaactaccagaagatcatgtgctgtctg
gttcaccgctacttgacctcaacgaggcagaagatgcaaagcacagaccaggccacggtg
gaaaatctgaacgacctgcgccaggacctgtccaagtttcgcaatgagatgagggacctg
ttgggcttccggacgtccaaatacgccatgttctacccgaggagctga
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