Mugil cephalus (flathead mullet): 124996054
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Entry
124996054 CDS
T08342
Symbol
shhA
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124996054 (shhA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcep01002
]
124996054 (shhA)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mcep00536
]
124996054 (shhA)
Peptidases and inhibitors [BR:
mcep01002
]
Cysteine peptidases
Family C46: hedgehog family
124996054 (shhA)
Glycosaminoglycan binding proteins [BR:
mcep00536
]
Heparan sulfate / Heparin
Morphogens
124996054 (shhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
DUF7764
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
124996054
NCBI-ProteinID:
XP_047424833
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Position
18:complement(8546352..8557067)
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AA seq
418 aa
AA seq
DB search
MLLWTKIVLAGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHYEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTKKAVKALQPGDRVLAADDDGNPIYTDFIM
FIDQDSTTRRVFYVIETDSGQKITLTAAHLIFVGGGGGGNSTDAEEGMSAVFASQVRRGQ
KVFVFDAERGRLVPVTVKRIYTQQHEGSFAPVTVQGTVVVDQVLASCYAVIEDHDLAHWA
LAPVRLAHWVSSLLFSSQPQVSAQSDGVHWYSKILYQLGTWLLDSHSIHPLGMSVYPS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccaaaatcgttttggccggtctcatctgcttgtccttggtgtcctct
gggatgggatgcggaccgggcaggggctacggcaggagaaggcacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaagatcacacgaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagctgaactcgctggccatctcggtgatgaaccagtggcccggggtg
aagctgcgggtcaccgagggctgggacgaggacggacaccactacgaggagtcgctccac
tacgagggcagggccgtggacatcaccacgtcggacagggacaagagcaaatacggcacc
ctgtccaggctggcggtggaagccggattcgactgggtctattatgaatctaaagctcac
atccactgctccgtgaaagcagaaaactcagtggcagcaaagtcaggcggctgcttccca
ggctcctccaccgtcacccttcaggatggcaccaagaaggctgtgaaagctctccaaccc
ggtgacagggtcctggcagcggatgacgacggaaacccgatttacaccgacttcatcatg
ttcatagaccaagactcgacgaccaggagggtcttctacgtcatcgaaaccgactcgggc
cagaaaataaccctcaccgcggcgcatctcatcttcgtcggcggcggaggcggcggcaac
tccacagatgcagaggaggggatgtcggcggttttcgccagccaagtccggcgcgggcaa
aaagtgttcgtgttcgacgccgagcgaggtcggctcgtgcccgtgaccgtaaaacggatt
tacacgcaacaacacgagggctcctttgcgccggtgaccgtgcaagggaccgtggtggtg
gaccaggtccttgcgtcctgttacgcagtgatcgaagaccacgacctggcgcactgggcc
ctggcgcccgtcaggctcgcccactgggtgtcctcgttgcttttcagctcccaacctcaa
gtcagtgcacagagcgacggcgtgcactggtactccaaaatcctttatcaattagggaca
tggctcttggacagccactcgatccatccacttgggatgtcagtatacccgagttga
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