Mugil cephalus (flathead mullet): 124996352
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Entry
124996352 CDS
T08342
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcep03021
]
124996352 (chd1)
03036 Chromosome and associated proteins [BR:
mcep03036
]
124996352 (chd1)
Transcription machinery [BR:
mcep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124996352 (chd1)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124996352 (chd1)
SLIK complex
124996352 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
124996352
NCBI-ProteinID:
XP_047425202
LinkDB
All DBs
Position
19:complement(21559653..21579109)
Genome browser
AA seq
1810 aa
AA seq
DB search
MAGRSENESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDTEKSKEKMEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQQQRQ
SSSNSGSDEDSSSSDESDSSSGSKRRKNSGSSDSGSGSESGSGSGSDSSARNNSDETASD
YEPSHKSKSKKPPTKMNFRNGKKSSTQKKKPPKCSSSDDEGDNYKKVVSAGPRRQATVNI
SYKEDEELKTDSDDLVEVLGEDVPQPEEDEFETLERVMDSRTGRKRATGSSTTVYAIEAD
GDPNANFNPHKEAGEIQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKDQEKK
KWLKAASPEDIEYLNCQEELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSE
CSWEDGALIAKKFQKCIDDYMSRNQSKTIPFRDCKVLKQRPRFVPMKKQPSYIGGEGLEL
RDYQLDSLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVPLST
LTSWQREIQLWAPQMNIVVYLGDISSRNMIRTHEWMHVHNKRLKFNILLTTYEILLKDKS
FLGSVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFHSWEMFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAI
QKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFLNRAEALQ
QLIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLKSRQFLFQRLDGSIKGE
MRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPFN
KEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKV
ANFTMMEDEDIDLDSERSQRSWDDIIPEEQRRRMEEEERQKELEEIYMLPRMRNCAKQIS
FNSNEGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKF
GGPLERLDAIARDAELVDKTEHDLKRLAETVHNGCVRTLRENPCGERTSGGRRGKVKGPT
FRISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIEWGKEDDSSL
LIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKE
AQKQAGTANSRKRKPRSKKSKTLKPTKTEEVIKSPSSDLPSDKRSDDEDEIEEEKEVAPV
KAPTRRSRADRVVVKEEEEEEEEDDDDEDDDDDDEPEQEEASSSGEMEVKEKEIKKEGKK
DKKEESCDIKEAKEPKEKKETKPLEAVYKLEESLEKNDTKPEVRERTKKPSDGPVHITAS
GENVPVSEESEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGD
HITECLKEYSNPDLIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNTR
SINTHSYKHADIERLKDNSHQDESSRDSYSSDRHQPSSRYHESSSSKERHSSESHRKTTV
GESRKRPYSSFSNGKDHRDRDHYRPDSRDRDRQDRYYNDSKHRKLDEFRTSRDRDHRLDV
KEHSHSDHRSSYRYHSDWQTEQRASASGPRSPRDQRSPYNSRSPMGHRSPFDYSSDHKST
PEQIWSSRKT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagcgagaatgaaagtgtaagcaacagcagtggcgaatcaagtaattct
gatgatgaatccggttctggatcgggctcagcatcagggtctggctcaggctccagttcc
agctcatccagcagcagcagccaatcagggagcagtgactcaggaagtggctcagactct
ggcagtcagtcagattctgatacagagaaatcaaaggagaagatggaaccaccaaataag
tcaaacattgatggagctgagttctggaagtcaaacccaagtatcctagcagtgcaaagg
tctgctatgctcaggaaacagcagcttcagcagcagcagcaacaacagcaacagagacaa
agctcatcaaatagtggatctgatgaggactcctcaagtagtgatgaatctgattcatca
agtggatccaaaaggagaaaaaattcaggctcctctgactcgggatcaggttctgaatct
gggagtggttctgggtcagactcatcagcacggaacaacagtgacgaaacagcgtcagac
tatgagcccagccataaaagcaaaagcaaaaagcctcccaccaagatgaattttcggaat
ggaaagaaaagcagcacccagaagaagaaacccccaaaatgttcttcttccgacgatgag
ggtgataactacaagaaagtggtgtctgcagggccacggcggcaggccacagtcaacatc
agctacaaggaggacgaggagctgaagacggactcagacgatttggtagaggttctgggt
gaagatgtcccacagcctgaggaagatgagtttgaaacactggagagagtgatggatagc
agaacgggaaggaaaagagcaacaggaagttcaacaacagtgtacgctatagaagcagat
ggggaccccaatgccaactttaatccccacaaagaagctggtgagatccagtatttaata
aagtggaagaactgggcccacatccataacacttgggagacagaggagacactgaaactg
caaaacgttaaaggcatgaagaaactggataatttcaagaagaaagatcaggagaaaaag
aaatggttgaaagcggcatcaccagaggatatagaatatttaaattgtcaagaagaatta
atggacgacttgcactctcagtaccagcttgtagagcgaatcataggacattcaaaccag
aaatcagcagctggctatcctgactacctgtgtaaatggcagggtttaccatactctgaa
tgtagctgggaagatggtgctctgattgccaaaaagtttcagaagtgcattgatgactac
atgagcagaaaccagtctaaaaccattccattcagagactgcaaggtgctgaaacagaga
cccaggttcgtgcctatgaagaagcagccatcttacataggaggtgaaggactggagctc
agagactaccagttggacagtttgaactggatggcccactcctggtgcaaaggcaacagt
tgcatccttgctgatgagatgggtttaggaaagacaattcagaccatctccttcctcaac
tacctgttcaatgagcaccaactctatgggcccttcttactggtggtacctctctccacg
ctaacatcttggcagagagaaatccagttatgggcccctcagatgaatattgtggtctac
ctgggagacatcagcagcaggaacatgatcagaacacatgagtggatgcatgtccataac
aagaggcttaaattcaacatcctcctcacaacgtatgagattcttctcaaggacaagtca
tttttgggcagtgttaactgggccttcattggtgtggatgaggcccaccgactgaaaaat
gatgactccctcctctacaagacaatgatcgacttcaagtccaatcacaggcttctgatc
acaggaacaccactccagaactccctgaaagagctatggtctttgctgcacttcatcatg
cctgagaagtttcattcttgggagatgtttgaggaggagcatggtaagggcagggactca
ggatacaccagtctacacaaagagctggaaccttttctgctacgacgtgtcaagaaggat
gtggagaaatctcttccggctaaagtggagcagatcctgagagtggagatgagtgctatc
cagaaacagtattacaaatggatcctgacccggaactacaaggctctgagtaaaggtacc
aaaggtagcacttcaggcttcctaaacatcatgatggagctgaagaagtgttgcaaccac
tgttaccttatcaagccaccagaggacaacgagtttctcaacagagctgaagctttacag
caactgatccgcagcagtggaaagctggttttgttggacaaactgctggtgcgcttgaag
gagcgaggtcacagagttctcatcttctcccagatggtacggatgctggatatcctcgct
gaatatctgaagagtcggcaattccttttccagagattagacggctccatcaaaggggag
atgaggaaacaggcattggatcattttaatgctgaaggttcagaggatttctgctttttg
ctatctacacgtgctggtggtctgggtatcaatctggcatcagctgacacagtagtcatc
tttgactcagactggaacccccaaaatgacctgcaggcccaggcccgagcccacaggatt
ggacagaaaagacaggtgaatatttaccgtctggtgacaaaaggctcagtggaggaagac
attattgagagggcaaagaagaaaatggtgctggatcaccttgtcattcagaggatggac
accacagggaagactgtcctccatactggttctgctccttccagttccgcaccgttcaac
aaggaggagctgtctgccatcttgaagtttggtgctgaggaacttttcaaagaaccagaa
ggtgaagagcaggaacctcaggaaatggacattgatgagattcttaaaagagctgagacc
agagagaacgaccctggaccctctacagtaggagaggagctgctgtctcaattcaaggtg
gccaacttcaccatgatggaggacgaggatatagacctggactctgagcgaagtcagcgg
agttgggatgacatcattcctgaggaacagaggaggaggatggaggaggaggagagacag
aaggagctggaagaaatctacatgctaccacgcatgaggaattgtgccaaacagataagc
tttaattctaatgaggggcggcaaagcaggaacaggaggtactctgggtccgacagcgac
tccccatcagatcgaaagaggccaaagaagagaggacggcctcggaccattccacgagaa
aatattaagggttttagtgatgcggagattcgaaggtttgtaaagagctataaaaaattt
ggaggaccactggaaaggttggatgctattgctcgtgatgctgaacttgtggacaagacg
gaacacgacctgaaacggttggcggagactgttcacaacggttgtgtgagaacactgcga
gaaaacccctgtggagagaggacttcaggaggaagaagagggaaggtaaagggccccaca
ttcaggatctctggagtgcaagttaatgccaagcttgttatctcacatgaggaagagctg
gctcctctccataaggccattcctgcagaccctgaggagagaaagaagtatatgattcca
tgccactcgaaggcagcgcactttgatattgagtggggtaaggaggacgactcaagcctc
ctcataggaatctatgagtatggttacggcagctgggagatgattaagatggacccagac
ctcaatctcacacacaagctcctaccagatgaccctgacaagaagccacaggccaaacag
ctacagaccagagcagactacctcatcaagttactgagcaaggacctggcaaaaaaagaa
gcgcagaaacaagcaggcacagccaattcacggaagaggaaaccaagaagtaaaaagagc
aagactctgaagccaactaagacagaagaggtgataaagagcccatcctcagatctccca
tcggacaagaggtcagatgatgaggatgaaattgaggaagaaaaggaggtggcaccagtg
aaggcaccaacgagacggagtcgggcggacagagtggtggtgaaagaggaggaggaagag
gaggaggaggatgacgacgatgaggacgacgacgacgacgatgagcctgagcaggaggag
gcttcttcatcaggggagatggaggtcaaagaaaaggagatcaaaaaagaaggaaaaaag
gataagaaggaggaaagttgtgacataaaagaggcaaaggaaccaaaagagaaaaaggag
acaaagcctctggaggcggtatacaaactggaggagagcctggaaaagaatgacacaaag
cctgaggtacgagaacggacgaaaaaaccctctgacgggccggttcatataacagccagt
ggagagaatgtgccagtatctgaggagtctgaagaactggaccagaggaccttcagtgtg
tgtaaagagaggatgcggccagtgaaagcagccctgaagcagctagacaggccagagaaa
gggctgtcggagcgcgagcagctggagcacacgagacagtgtctcatcaagattggagac
cacatcacagagtgtctgaaggagtactcaaatcctgacctgatcaaacagtggagaaaa
aacctgtggatatttgtttccaaattcactgagtttgatgccagaaaactacataaactg
tataagcatgcaatcaagaaaaggcaagagaatgcccaggcaatggagcagaacactaga
agtataaatacccacagctataaacatgcagatattgaaagactgaaggacaactcccac
caggacgagagcagcagggacagctacagctcagacaggcatcagccttcaagtcgatac
cacgaaagcagcagcagcaaggagagacacagctctgaatcccacaggaagacgacagtg
ggagagtccaggaaaagaccgtactcctccttcagcaacggcaaagaccaccgagacaga
gaccactacagaccagacagccgggacagagacagacaggacagatactacaacgacagt
aaacacaggaagctggatgaattccgcaccagcagagaccgagaccatcggctggacgtg
aaggaacattcccactcagaccaccgctcttcctaccgataccactcagactggcagaca
gagcagagagcctcagccagcgggccccgctctccacgagaccagcgctcaccctacaac
tcccgctcaccaatgggacaccgctcacctttcgactactcgtcagaccacaagagcaca
ccggagcagatctggagcagccgcaagacataa
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integrated database retrieval system
