Mugil cephalus (flathead mullet): 124996477
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Entry
124996477 CDS
T08342
Symbol
thbs4b
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04145
Phagosome
mcep04510
Focal adhesion
mcep04512
ECM-receptor interaction
mcep04518
Integrin signaling
mcep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124996477 (thbs4b)
04518 Integrin signaling
124996477 (thbs4b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124996477 (thbs4b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124996477 (thbs4b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124996477 (thbs4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcep04131
]
124996477 (thbs4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcep04147
]
124996477 (thbs4b)
00536 Glycosaminoglycan binding proteins [BR:
mcep00536
]
124996477 (thbs4b)
Membrane trafficking [BR:
mcep04131
]
Endocytosis
Phagocytosis
Opsonins
124996477 (thbs4b)
Exosome [BR:
mcep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124996477 (thbs4b)
Exosomal proteins of colorectal cancer cells
124996477 (thbs4b)
Exosomal proteins of bladder cancer cells
124996477 (thbs4b)
Glycosaminoglycan binding proteins [BR:
mcep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124996477 (thbs4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
cEGF
DUF7630
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
124996477
NCBI-ProteinID:
XP_047425491
LinkDB
All DBs
Position
19:complement(7244580..7259981)
Genome browser
AA seq
940 aa
AA seq
DB search
MGVWTALILASQLLLKLCLNVEAQALVYDLLTSPDCLPDLLQGGLTEQGVNEAFILASFK
LQPKTGTTVFSLYNPRDNSKYFEFTVMGKLNRAVLRYQRTDKRMSSVTFNNLVLADGQKH
RLLFHLRGMQQQGPGGVELHLDCRLVETVRDLPAAFQGLPAGYGTVDLKTMQAREQENLD
ELKLVVGDSFENVASLQDCHFQQRDSVQTLGVNTKQLSNQMLELTKVINELKDVLIQQVK
ETSFLRNTISECQACGLGGTEVVKQRCTPGVCFRDDMCRETADGVECAPCPDGYTGDGFN
CDDVNECQFNPCFPGVKCVNTVPGFRCDACPLGFTGMAVEGVGILYAQNNKQVCDDIDEC
KGPNNGGCAANSICHNSVGSYHCGSCKTGFTGDQVKGCKPEISCGNSLTNPCDVNAQCIP
ERDGSITCQCGIGWAGNGYLCGKDTDIDGYPDEKLKCKDANCRKDNCVYVPNSGQEDADR
DGHGDACDDDADGDGIPNEQDNCWLKPNLDQRNSDKDSHGDACDNCRMVENPDQRDTDSD
GKGDACDDDMDGDGIKNFLDNCPRVQNRDQLDRDGDGVGNACDSCPDIPNPNQSDIDNDL
VGDSCDTNQDSDGDGHQDTKDNCPLVINSSQLDTDKDGLGDECDDDDDNDGIPDNVPPGP
DNCRLVPNPDQTDDNNDGVGDVCESDFDQDKVIDRIDNCPENAEVTLTDFRAYQTVVLDP
EGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIF
GYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSTSGPGEHLRNSLWHTGDTN
DQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRARFYEGTELVADSGVTIDTTMRGGR
LGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQHGVDSL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgtggacagccctgattctggcctcgcagctgctattgaaactgtgcttgaac
gtggaagcccaggctttggtgtatgatctgctcacctcgcccgattgcctgccagacctg
ctgcaggggggtctcaccgagcaaggggtgaatgaggctttcatcctggcctccttcaag
ttgcaacccaagaccggaaccactgtgtttagcctgtacaaccccagggacaacagcaag
tactttgagttcaccgtgatggggaagctgaacagagccgtgttacgctaccagcggact
gacaagaggatgagctctgttaccttcaacaacctggtgctggcagatggccaaaaacac
cgactgctgttccacctgagggggatgcagcagcaggggccaggcggggtggagctgcat
ctggactgcaggctggtggagacggtcagagaccttcccgctgccttccagggtttgcca
gcaggctatggtacggtggatttaaagaccatgcaggccagagagcaggagaacttggat
gagctcaagctggtggtcggggactcatttgagaacgttgcttcgttacaagactgccat
ttccagcagagagactccgttcaaactctgggggtcaacacgaagcagctgtccaatcaa
atgctggagttgacgaaggtgataaacgagctgaaagacgtcctcattcagcaggtcaaa
gaaacctcctttctcaggaacacaatctcagagtgtcaggcctgcggtctgggaggaacc
gaggtggtgaaacagaggtgcaccccgggcgtctgtttccgtgacgatatgtgcagagag
accgcggacggcgtggagtgtgcgccctgtcctgatggatacaccggggatgggttcaac
tgtgacgatgtgaatgagtgccagtttaacccctgcttccctggagtgaagtgcgtcaac
accgtcccgggcttccgctgcgacgcctgtccgctgggcttcaccggcatggccgtggag
ggggtcggcattttgtacgctcagaacaacaaacaggtctgtgatgatattgacgaatgc
aaaggacccaacaacggaggatgtgctgccaactcaatctgtcacaactctgtgggctcc
taccattgtggcagctgtaagacaggtttcacaggagaccaggtcaagggctgtaagccg
gagatcagctgcggcaacagcctgaccaacccctgcgatgtcaacgcccagtgcatccca
gaaagagacgggtccatcacctgccagtgcgggatcggctgggccgggaatggatacctg
tgcgggaaggacactgatattgatggttatccggatgagaagctcaaatgcaaggatgca
aattgtagaaaggataactgtgtctatgtccctaactctggtcaagaggacgcagacagg
gacggtcatggagatgcctgcgacgacgacgcagatggtgacggtattccaaacgagcag
gacaactgctggttaaagcccaacttggaccagaggaacagcgacaaggacagccacggc
gacgcctgcgataactgtcgcatggtggagaaccctgaccagagagacactgacagcgac
ggcaaaggggatgcctgcgatgacgacatggacggagacggtataaagaatttcctggac
aactgcccacgtgtccagaacagagaccaactggaccgggatggagatggagtgggaaat
gcctgcgacagctgtcctgacatccccaacccaaaccagtccgacattgataacgacctg
gttggggactcctgcgacacaaaccaagacagcgatggcgatggtcaccaggataccaag
gacaattgcccactcgtgatcaacagctcccagctggacaccgacaaagacggactgggt
gacgagtgtgacgatgacgatgacaatgacgggattccggataatgtgccgccaggacca
gacaactgtcggctggtaccaaaccccgaccagactgatgacaacaacgatggcgtggga
gatgtgtgcgagtctgactttgaccaggacaaagtgattgacaggatcgacaactgtcct
gagaacgcagaggtgaccttgactgacttcagggcctatcagacggtggtgctggacccc
gagggcgatgcccagattgaccccaactgggttgtgttgaaccagggaatggaaattgtc
cagactatgaacagcgacccaggacttgctgttggttacactgctttcagcggagtggac
tttgagggcacgtttcacgtgaacacagtcaccgatgacgactacgccggcttcatcttc
ggctaccaggactcgtcctccttctacgtggtgatgtggaagcagaccgaacagacgtac
tggcaggcgacgcccttcagagccgtggccgagcccggcatccagctcaaggcggtgaaa
tctacatcaggccccggggagcacttgagaaactcgctgtggcacactggagacaccaac
gaccaggtgcgcctgctgtggaaggacccgagaaacgtgggctggaaggacaaggtgtcc
taccgctggtacttgcagcaccgtccgcaggttgggtacatcagagctcgcttttatgag
ggaactgagctggttgcagactctggcgtgaccatcgacacgaccatgagaggaggacga
cttggcgtcttctgtttctctcaagaaaacatcatctggtccaatctgaaatatcgctgc
aacgacaccatcccagaggatttccaggagttcagcactcagcacggagtcgactcgctc
taa
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