Mugil cephalus (flathead mullet): 124996521
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Entry
124996521 CDS
T08342
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124996521 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcep04990
]
124996521 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
mcep04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
124996521 (pdlim5b)
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124996521
NCBI-ProteinID:
XP_047425587
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Position
19:10253936..10289897
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AA seq
604 aa
AA seq
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MNNSYSVSLAGPAPWGFRLQGGKDFCLPLTISRLTDGGKAVKANISVGDIILSINGVSAD
SMTHLEAQNKIKACTGNLGLTLQRPSAAPGNGVLKDEPQEIIKPVPIAHPTSSTAYTKPL
SQANPAYNKTARPFGAGSGGVAGSSSSPAAPKVATIPSESSAFTPAAPSQPLQPPFPLKS
ASNSAPANSLPKPSLGPSSTRSKSPTPARVTAPPPNPNVPHSSVYNTPINLYSSANACEV
AMGQRRGLLESQGLSEHVNGKVFMEPENNASLVSDASKKRLIEDTEDWHPRTGTSQSRSF
RILAQLTGTEKEQTPENSGKNEAVDKFTPSAHTSPAAKTFSKSAAAPRNGSVGPASPFKT
PPAQNKASFLPGAPSGFPKGGVGPSFGKVSNLPTKGPDRPTPQPHPQDLNSLVQRAEHIP
AGKRTPMCNKCNNVIRGPFLVAMGMSWHPEEFNCAHCHSSLAECGFVEEKDQVYCERCYE
QFFAPTCARCNTKILGEVMNALKQTWHVSCFVCAACHQPIRGNMFHMEDGQPYCEQDYYR
MFGTNCHGCDFPIEAGDKFLEALGFTWHDTCFVCTVCSASLEGQAFFSKKDKPLCKKHAH
TVNV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagctacagcgtctccctggctggtcctgccccctggggcttcagactgcaa
ggagggaaagacttctgtctgcccctcaccatctcacggttgaccgatggagggaaggca
gtgaaagccaacatcagtgttggagacatcattctgtccattaatggtgtttctgcagac
agcatgactcacctagaggcccagaacaagattaaggcctgcacgggcaacctcggcctc
actctacagagaccctctgctgccccaggcaatggcgtgctgaaggacgaacctcaagaa
atcattaagcctgttcccatcgctcaccccacctcgagcaccgcgtacaccaagccactg
agtcaggccaaccccgcctacaacaagacagcccggccgttcggggcgggcagcggaggt
gtcgcgggttcttcctcgtccccggctgctcccaaagtggcgaccatcccctccgagtcg
tccgctttcacccccgccgccccgtctcagccgctgcagcctccgttcccgcttaagtcg
gcctctaactcggctccggccaattcacttcccaagcccagccttggcccctcttccacc
agatctaaatcccccactccggccagagtgaccgcccccccgcccaatcccaatgtccca
cactcctccgtctataacacacctatcaacctgtactccagtgccaatgcttgtgaggtg
gctatgggacagaggcgaggtcttttggagagccaagggctgtcagagcatgtcaacggg
aaagttttcatggagcctgagaataacgcttccctggttagcgacgccagcaagaaacgc
ctgattgaggacaccgaggactggcatccacgaacgggaacatcccagtcccgctccttc
cgtatcctggcccagctcactggcactgagaaggagcaaactccagagaacagtggaaag
aacgaagcagttgacaaattcactccctctgcgcacacgtcgcctgctgcgaaaacattt
tccaaatctgcagcagcaccgaggaacggcagcgttggccccgcatctccatttaagacc
cccccagcccagaacaaggcctccttcctgcctggagccccatcaggttttcctaagggc
ggagtaggaccctcatttggcaaagtttccaaccttcctaccaaaggtccggaccgcccc
accccgcagccacatccacaggacctcaactccctggtgcagcgggccgagcacatcccg
gcgggcaagcgcaccccgatgtgcaacaagtgcaacaatgtcatcaggggcccgttcctc
gtggccatgggcatgtcgtggcacccagaggaattcaactgtgctcactgccactcctcc
ctggcagagtgcggcttcgtggaggagaaggaccaggtgtactgcgagcgctgctacgag
cagttcttcgctcccacctgcgcccgctgcaacacgaagatcctcggggaagtcatgaac
gccctgaagcagacctggcatgtgtcctgtttcgtctgcgcggcctgccatcagccaatc
aggggcaacatgtttcacatggaggacggacagccatactgtgaacaagactactaccgc
atgtttgggaccaactgccacggctgtgacttccccatcgaggccggggacaagttcctg
gaggccctaggcttcacctggcacgacacctgcttcgtttgcacggtctgctctgctagc
ctggaaggtcaggcattcttctccaaaaaggacaagcctttgtgcaagaagcatgcccac
accgtcaacgtctga
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