Mugil cephalus (flathead mullet): 124996990
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Entry
124996990 CDS
T08342
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124996990 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcep03041
]
124996990 (prpf4)
Spliceosome [BR:
mcep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124996990 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
PRP4
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SCAP
Ge1_WD40
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_WDR11_1st
WD40_like
Nbas_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
124996990
NCBI-ProteinID:
XP_047426403
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All DBs
Position
19:1118223..1130179
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AA seq
498 aa
AA seq
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MSDEEDAAPAVKRSRVFYGSLEEKERERLRSEVTGGDAVRAGIDAGNINISSGDTLEMEE
RVSERQQEALAEFERRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRERLRSVL
SVVGPDALKKSRKDEERAKRSQDECHQTWYHEGSASLKDARLWLAKYSLPRAMRRLESAR
AQKDVAEATKTIRQQELHKSLRNLNNFCSQIGDDRPISFCHFSPDSTMLATASWSGLCKL
WSVPDCSLIRTLRGHNTNVGAIVFRPQAGVSLDQSDVSLASCAADGSVKLWNLESDEPVA
DIEGHSDRVSRVSWHPSGRFLGTTWFSMIIVRAGRVRRILHRSRNHDLTSPDGSLAATGG
LDAFGRVWDLRTGRCIVFLEGHLREIYSLHFSPNGYHLATGSGDNTCKVWELRNRKCLYT
VPAHQNLLSAVRFQPTDGHFLLTGAYDNTAKVWSHPGWTPLKTLAGHEGKVMGVDVSPDG
KLIATSSYDRTFKLWLSE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaggaggacgcagctccggccgtgaagaggagtcgcgttttctacggaagc
ctggaggagaaagaacgggagcgcctgaggtcagaggtcacgggaggagatgcggtcagg
gcagggatcgatgcgggaaacatcaacatctcttcaggggacactctggagatggaggag
agggtcagtgagaggcagcaggaagctctggctgagttcgagcggcggcggcgagcgcga
cagatcacggtctccacggacgacgccgaggtgaaggccggcctccgcgcgctgggagaa
ccaatcacgttgtttggagagggaccagctgatcgcagggagcggctgcgcagcgttctc
tctgtggtcggtccagacgctctgaagaagtccaggaaagacgaggaacgagccaagaga
tcacaggacgagtgtcaccagacatggtaccacgaaggctccgcctccctgaaggacgct
cgactctggttggctaaatactctctgccccgagctatgaggcgtctggagtctgcacgc
gctcagaaggatgttgccgaggcaaccaagaccatccggcaacaagagctgcacaagagc
ctgcggaacctgaacaacttctgcagtcaaatcggtgacgatcgaccaatcagcttctgc
cacttcagccccgattcaacgatgctagccacagcctcctggagtggcctctgtaagctg
tggtctgtccctgactgcagcctcatccgtacactgagaggacacaacacgaacgtgggc
gccatcgtcttccgtccacaggccggagtttctctggaccaatcagacgtcagcttggcc
tcatgtgctgcagatggatccgtgaagctttggaacctagagagtgacgaaccagtggcg
gacattgagggacacagtgatcgagtgtctcgagtctcctggcatccgtcaggaaggttc
ctgggaaccacctggttcagcatgataatcgtgcgcgccgggagggtcaggaggattctc
cacagaagccgcaatcacgacctcacttcacccgacgggtccctggcagcgaccggaggc
ctggatgcgttcggccgggtctgggaccttcggaccgggcgctgcatcgtgttcctggag
ggtcacctgagggagatctacagcctccacttctcccccaacggatatcatctggccaca
ggaagtggagacaacacctgtaaggtctgggagctcagaaacaggaagtgcctgtacaca
gtccccgcccaccagaacctgctgtcagctgttcgcttccagcccacagacggtcacttc
ctgttgacgggcgcatacgacaacacggcgaaggtttggagtcacccaggctggacgccg
ctgaagacgctggcgggacacgaggggaaggtgatgggcgtcgacgtgtcacctgatggg
aaactaatcgccaccagctcctacgaccgaaccttcaaactctggctctctgagtga
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integrated database retrieval system
