Mugil cephalus (flathead mullet): 124997011
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Entry
124997011 CDS
T08342
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
124997011
03041 Spliceosome [BR:
mcep03041
]
124997011
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124997011
Spliceosome [BR:
mcep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124997011
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_Nup35
Nup35_RRM_2
Calcipressin
Motif
Other DBs
NCBI-GeneID:
124997011
NCBI-ProteinID:
XP_047426428
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All DBs
Position
19:3743897..3755037
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AA seq
386 aa
AA seq
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MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETPSTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGY
SFVRFNSHEAAAHAIVSVNGTAIEGYVVKCYWGKETTDMVQGPIQQVQMAQQNTVSFAAQ
PYNQWGQWYSNTQQIGQYVPNGWQVPSYGVYGQTWDQQGYNQLHAGAGWTGVGAVSNGGM
VEPGQGVNGTVLTNQAGMSTAGYHTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagcccaaaaccctgtatgtgggaaatctgtcccgagacgtgacggag
gctctcatcctggagctgtttggccagatcggaccctgcaaaagctgtaaaatgatagta
gatacagcaggacatgatccgtactgctttgtggagttctatgaacatagacatgccact
gccacaatagcagccatgaacggtcggaaaatactgggtaaggaggtaaaggtcaactgg
gccacgacgccaaccagccaaaagaaagacacaagcagtcacttccacgtctttgtcgga
gacctaagtcctgaaatcaccacagacgacataaaggcagcgtttgctccgtttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcagaaaacgccattcagcagatggggggtcagtgg
ttggggggacggcagatcaggaccaactgggccaccaggaagccggcgcctaaaaccaca
aacgaaacgcctagtaccaaacagctatcgtttgacgaggtggtgaaccagtccagtccc
agcaactgcaccgtctactgtggaggagtcacgacgggcctcactgagcaaattatgaga
cagaccttctcgcctttcggccaaatcatggaaatccgtgttttcccggagaaaggctac
tcgttcgtgaggttcaactcccacgaggcagcggctcacgccatcgtttcggtcaacggc
acggccatcgagggctacgtcgtcaagtgctactggggcaaagagacgacggacatggtc
cagggccccatacagcaagtacagatggcacagcagaacacggtgagcttcgcggcgcag
ccctacaaccagtgggggcagtggtacagcaacacgcagcagatcggccagtacgttccc
aacgggtggcaggtgccgagctacggcgtctacggacaaacctgggatcagcagggctac
aatcagttacacgctggagctggatggacgggcgtcggcgccgtgagtaacggcgggatg
gtggagcccgggcagggagtcaacgggacggtgctaaccaaccaggccggcatgagcacc
gccggctaccacacccactga
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