Mugil cephalus (flathead mullet): 124997511
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Entry
124997511 CDS
T08342
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mcep01001
]
124997511 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcep04054
]
124997511 (ciita)
Enzymes [BR:
mcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124997511 (ciita)
Protein kinases [BR:
mcep01001
]
Serine/threonine kinases: Other
TAF1 family
124997511 (ciita)
Pattern recognition receptors [BR:
mcep04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124997511 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
DUF7885
LRR_14
AAA_16
nSTAND_NTPase5
AAA_22
nSTAND3
AAA
NB-ARC
VapE-like_dom
STATa_Ig
Motif
Other DBs
NCBI-GeneID:
124997511
NCBI-ProteinID:
XP_047427219
LinkDB
All DBs
Position
20:complement(571958..589800)
Genome browser
AA seq
1458 aa
AA seq
DB search
MAQFQEVLGEVRSALASASPAELRALVQGLVEERIISEAYSRSLQQLTEGGAAPESEPEL
DGWLVSGGSGSWDWTGSVMDGRRERTGVDTQTLREMLRGSEKKGSLEEAEKEWLEEVSRR
IAVPLWQHWDTGRRMLLPLVPCWTRGSALDQDEEVELADMCRTLDESEGISSCAELDSAD
SSVGLGPGLGLGPGLGLGPGPEAGLDLDPFRSFGEGWTPSGPTQSNRRLSDKDHVDSFSP
APDSGLTPPVTGITEYVDTFSRTISSSDGGDNVDSLWDAKMQEVDPDVIIPSDFGDLPED
LSEYMDDSYLNTDVLLGDPWFNSTDEFSDFPLPTEASSGDAHQQRHTTKLPDKAKRRKTQ
RAPSSPLCPDETPRPKRRKKAAGKTNTTEPESEPDSVQGPELSPVKTMRGPCTTPQRILH
IYPSHPGSPIPIQFIALREAPGYQVVRLSPPPPLIRFPLPNTAAAPAYILVPASSPPSAR
QVPPLSPVDGAVAPVQMSSSPPGSLSDTASKAMSPPCASPLSPINDSSLCKESSPPPPPP
PQSPTASPVPDLPPAVKEYIQEAKAHVGLMCRDMEEGLSLTSHYVDVKVNQRETLRSGKN
TNKTLDKELVIMGDTDRQKSCVEPAQMFEASSGDKSRLYMLLLGNAGMGKTTLIKKLCLD
WSRDAVPQFDFVFLLDGKSLTLTEPVYSLRTLLLSVSSFASSCPDPEEVYAQIAAAPKRV
LIIFDGFDELRDYEVLLQTQEKELVASLQRDGRAQSFTVRQLYSALLQRILLPGCTLLLS
TRPRGSASQLLRRADGFLEVCGFTPTHVETYLSQYFTDPVLRASALELLRSSSYLRLLCW
NPGLCRLVCLVLEQSAGLEVLPRSLTGLCHEVLRLKMDKDGKRTETDAETQVPETEPQPE
PFERSQVKTCHKQRFQRGRRTKLQETELDEVDEETSQRVGGAAERTEDRQLLSQLSALAW
DGVKANSSILPKGPATSGKLQEFGLRMGLLLSHRLRTTRRTGGGERREVVEDHILLWANP
FLQSYLAAVHLSLSRTISDRAFLQTLPFHAGAKARRRPQREELELTQRLTVGLLFHNRTE
LQTLQTLQTLHPTSCRDLLVSRQALVLKHMEGLNYGDLSPSQVLEACHYVYEASRVSGSA
RLVSHLAANLPELLTFGGVPLGPPDVFAVQHALDQARRDGRSFSLDLENSGIQICGLRAL
VGLSNISTYRACIADVISLWKQLEEDEGEVELLQGAVSKFKIHPLKATQVCHIEHLAKLV
DIHVHKRITESSSRSESILVDGVPAVNELHKLEFELGPDLGPLALPKLWELLPGLHNLQH
LDLENCKIGDEGAEKLADALVSLCSLEILNLSQNCIGDQGLSKLSSTLRDLPRLHCLSLY
SNVISDEGAESLAAVLPHMASLTDLDVKYNKLTDVGAQSLGASLKNCKRIRSLRMWNQCI
PYGVFERLQHQDARILWH
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttccaggaggttttgggtgaagtgcgctcggctctggcctcggcgtctccc
gccgagctccgggctctggtccagggtctggtggaggagaggatcatctcagaggcgtac
agcaggagtctgcagcagctcactgagggaggggccgcacctgagtctgagccggagctg
gacgggtggttggtgtctggggggtccggcagctgggactggacggggtcggtgatggac
ggacggagggagaggacgggcgtggacacacagactctgagggagatgctgagaggctct
gagaagaaggggagtttggaggaggctgagaaggagtggttagaggaggtgtctcggagg
atcgcggtgcctctgtggcagcactgggacacaggacgcaggatgttgctgcctctggtt
ccttgttggacccgtggttctgctctggaccaggacgaggaagtggagctcgctgacatg
tgcaggacactggacgagagcgaaggcatctcctcctgcgccgagctggactcagcagac
tccagcgtgggtctgggtccgggtctgggtctgggtccgggtctgggtctgggtccgggt
cctgaagctggactcgacctggatcctttcagaagctttggagaaggatggactccctca
ggaccgacacagtctaacaggaggctgagtgataaggaccatgtggactcgttcagtccg
gctccagactccggcctgacccccccggtcacggggatcacagagtacgtggacaccttc
tccaggacgatcagcagctcagacggaggagacaacgtggactcactctgggatgccaag
atgcaggaggtggatccggacgttatcatcccctcagactttggagatttaccagaagat
ttatccgaatacatggacgacagttacctgaacacagacgtcctcctcggtgacccctgg
tttaactctacagatgaattcagtgactttcctttacccacggaagcatccagcggtgac
gctcaccagcagagacacacgaccaaactaccagacaaagcaaagagacgaaagacacag
agagctccttcgtcacctctgtgtccagacgagacgccgagacccaaacgcaggaaaaaa
gcagcaggtaaaacaaacaccacagagccagagtctgagccagactccgttcaaggacca
gagctgagtccagtaaagaccatgagaggtccctgcacaactccacagagaatcctccac
atctacccgtcccacccaggctcccccatccccattcagttcatcgccctccgagaggcc
cctgggtaccaggtggtccggctttccccccctcctcctttaataaggttcccactcccc
aacacagcggctgctccagcctatatattagttcctgcgtcgtctcctccttccgctcgt
caggttcctcctctttccccagtggatggagcagtagcaccggtccagatgagttcatct
cctccaggttctctctcggacacggccagcaaagccatgtctcccccttgtgcctcaccc
ctctcccccattaatgactcgtctctgtgcaaagagtcatctcctcctcctcctcctcct
cctcagtctcccactgcctcccccgtccccgacctcccaccggcagttaaggagtacatc
caggaagccaaagcccacgtcggcctgatgtgccgggacatggaggaaggcctgagcctg
acgtcgcattacgtggacgtgaaagtgaaccagagagagactcttcgttcaggaaagaac
acaaacaaaaccctggacaaggagctcgtcatcatgggagacacagaccgtcagaagagc
tgtgtggagcccgcccagatgttcgaggcctcatctggagacaagtcccggctctacatg
ctgctgctcggcaacgccggcatggggaagaccaccctgataaagaagctgtgtctggac
tggtccagagacgccgtccctcagtttgactttgtcttcctgctggatgggaagagtctg
acgttgacagagcccgtctacagcctccggacgctcctgctcagcgtctcctccttcgcc
tcctcctgcccggacccggaggaggtgtacgctcagatcgccgccgcgcccaaacgcgtt
ctcatcatcttcgacggcttcgacgagctgcgcgactacgaagttcttctgcagacgcag
gagaaggagctggtggcgtcgctgcagagggacggtcgagctcagagcttcaccgtcagg
cagctgtactccgccctcctccagaggatcctgctcccgggctgcaccctgctcctctcc
acccggcccagaggctccgccagtcagctgctccgccgtgcggacggcttcctggaggtc
tgcggcttcaccccgacccacgtggagacgtatctgtcccagtacttcacggaccccgtc
ctcagggcctcggccctggagctcctgaggagcagcagctacctgcgtctcctctgctgg
aaccccgggctgtgtcgcctggtgtgtttggttctggagcagtccgcagggctggaggtt
ctgcccaggtctttaactggactctgtcatgaggtgctgcgtctgaaaatggacaaagac
ggtaagaggacagagacagacgctgagacacaggttcctgaaacggagccgcagccagaa
ccttttgaaaggtctcaggtgaagacgtgtcacaaacagaggtttcaaagaggaaggagg
accaagctccaagagacggagctggacgaagtggacgaggagacgtcccagagagttgga
ggggcagcagagaggacagaggacagacagctgctgtcccagctgagcgctttggcctgg
gacggggtcaaagcaaactccagcatccttcccaagggaccggccacgtctggaaaactc
caggagttcggtctcaggatgggactcctcctgtctcaccgcctgaggacgacgaggagg
acgggaggaggagagaggagggaggtggtggaggatcacatcctgttgtgggccaaccct
tttctccagagctacttggcagccgttcatctgtctttgtctcgaactatttcagaccga
gctttcctccagaccctgcccttccatgcgggagccaaggcccggcgccggcctcagagg
gaggagctggagctcacgcagcgtctcacggtcggcctcctgttccacaacaggacggag
ctgcagacgctccagacgctccagacgctccatccgacgtcgtgcagggacctgctggtc
agcaggcaggcgctggtgctgaaacacatggagggtctgaactacggagacctgagcccc
tcccaggtcctggaggcctgtcactatgtttacgaggccagcagagtctctggcagcgct
cggctggtctctcacctggctgcaaacctcccagagctcctgacgtttggtggcgtcccc
ctcgggccgccggacgtcttcgccgtgcagcacgccctggaccaggccaggagggacggg
aggagcttcagcctggacctggagaactcagggatacagatctgtggactcagggctctg
gtcggcctcagcaacatcagcacgtacagggcctgcatcgctgacgtcatcagcctgtgg
aagcagctggaggaggacgagggggaggtcgagctcctgcagggggcggtgtctaagttc
aagatccaccccctgaaagccacacaggtgtgtcacatcgagcacctggccaagctggtg
gacatccacgtgcacaagaggataacggagagctccagccgatcagagtccatcctggtg
gacggcgtacctgcagtcaatgagctgcacaagctggagtttgagctcggtccagatctt
ggtcctctggctcttcctaaactctgggagctccttccaggcctccacaacctgcagcac
ctggacctggagaactgtaagattggagatgaaggagcagagaagctggcggatgctctg
gtctccctctgttctctggagattctaaatctgtctcagaactgcatcggggaccagggg
ttgagcaaactgtcgtccacgctgagggatctgccccggctgcactgtttgagcctctac
agtaacgtgatctcagacgaaggagcagagagtttagcagctgttctcccacacatggcg
tcgctcactgacctggacgtcaaatacaacaagctgacggacgtaggagcccagagttta
ggagccagtctgaagaactgcaagaggatcaggtctctgaggatgtggaaccagtgcatt
ccctacggggtgtttgagaggctgcagcatcaggacgctcggatcctgtggcattag
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